Publications by authors named "Alok Maity"

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Cell-attribute aware community detection improves differential abundance testing from single-cell RNA-Seq data.
Alok K Maity, Andrew E Teschendorff

Nat Commun· June 2023

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Myoscaffolds reveal laminin scarring is detrimental for stem cell function while sarcospan induces compensatory fibrosis.
Kristen M Stearns-Reider, Michael R Hicks, Katherine G Hammond, Joseph C Reynolds, Alok Maity

NPJ Regen Med· March 2023

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Distance covariance entropy reveals primed states and bifurcation dynamics in single-cell RNA-Seq data.
Qi Luo, Alok K Maity, Andrew E Teschendorff

iScience· December 2022

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Computational Identification of Preneoplastic Cells Displaying High Stemness and Risk of Cancer Progression.
Tianyuan Liu, Xuan Zhao, Yuan Lin, Qi Luo, Shaosen Zhang, Alok K Maity

Cancer Res· July 2022

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Epigenetic fluctuations underlie gene expression timescales and variability.
Ryan Lannan, Alok Maity, Roy Wollman

Physiol Genomics· June 2022

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Inference of age-associated transcription factor regulatory activity changes in single cells.
Alok K Maity, Xue Hu, Tianyu Zhu, Andrew E Teschendorff

Nat Aging· June 2022

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Novel epigenetic network biomarkers for early detection of esophageal cancer.
Alok K Maity, Timothy C Stone, Vanessa Ward, Amy P Webster, Zhen Yang

Clin Epigenetics· February 2022

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Ultra-fast scalable estimation of single-cell differentiation potency from scRNA-Seq data.
Andrew E Teschendorff, Alok K Maity, Xue Hu, Chen Weiyan, Matthias Lechner

Bioinformatics· July 2021

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Information transmission from NFkB signaling dynamics to gene expression.
Alok Maity, Roy Wollman

PLoS Comput Biol· August 2020

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GATA3 Mediates a Fast, Irreversible Commitment to BMP4-Driven Differentiation in Human Embryonic Stem Cells.
Alexandra Gunne-Braden, Adrienne Sullivan, Borzo Gharibi, Rahuman S M Sheriff, Alok Maity

Cell Stem Cell· May 2020

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Role of relaxation time scale in noisy signal transduction.
Alok Kumar Maity, Pinaki Chaudhury, Suman K Banik

PLoS One· February 2016

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Analysis of DevR regulated genes in Mycobacterium tuberculosis.
Arnab Bandyopadhyay, Soumi Biswas, Alok Kumar Maity, Suman K Banik

Syst Synth Biol· March 2014

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Role of functionality in two-component signal transduction: a stochastic study.
Alok Kumar Maity, Arnab Bandyopadhyay, Pinaki Chaudhury, Suman K Banik

Phys Rev E Stat Nonlin Soft Matter Phys· March 2014

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Quantification of noise in bifunctionality-induced post-translational modification.
Alok Kumar Maity, Arnab Bandyopadhyay, Sudip Chattopadhyay, Jyotipratim Ray Chaudhuri, Ralf Metzler

Phys Rev E Stat Nonlin Soft Matter Phys· September 2013

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