Publications by authors named "Alyssa Pyke"

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Rectal swabs vs bulk faeces PCR testing for the diagnosis of enteric conditions (RecSwabFaeces): Protocol for a single group diagnostic accuracy comparative trial.
Madisen Sadie Roser, Megan K Young, Dustylee Williams, Shradha Subedi, Donna Barnekow, Alyssa Pyke

PLoS One· August 2025

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Ross River virus genomes from Australia and the Pacific display coincidental and antagonistic codon usage patterns with common vertebrate hosts and a principal vector.
Eugene T Madzokere, Wesley Freppel, Alyssa T Pyke, Stacey E Lynch, Peter T Mee

Virology· July 2025

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Measles secondary vaccine failure in a childcare setting: an outbreak report.
Donna Barnekow, Debbie Neucom, Wendy Tout, Dustylee Williams, Michael J Thomas, Alyssa Pyke

Commun Dis Intell (2018)· November 2024

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Independent repeated mutations within the alphaviruses Ross River virus and Barmah Forest virus indicates convergent evolution and past positive selection in ancestral populations despite ongoing purifying selection.
Alyssa T Pyke, Daniel J Wilson, Alice Michie, John S Mackenzie, Allison Imrie

Virus Evol· September 2024

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First Isolation of Japanese Encephalitis Virus Genotype IV from Mosquitoes in Australia.
Alyssa T Pyke, Peter Burtonclay, Nirdesh Poudel, Wayne Ingall, Neelima Nair

Vector Borne Zoonotic Dis· July 2024

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Pteropine orthoreoviruses use cell surface heparan sulphate as an attachment receptor.
Chee Wah Tan, Akshamal M Gamage, Wee Chee Yap, Leon Jia Wei Tang, Yuan Sun, Alyssa Pyke

Emerg Microbes Infect· December 2023

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Genomic Analysis of Sindbis Virus Reveals Uncharacterized Diversity within the Australasian Region, and Support for Revised SINV Taxonomy.
Alice Michie, Timo Ernst, Alyssa T Pyke, Jay Nicholson, John S Mackenzie

Viruses· December 2023

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First case of mpox diagnosed in Queensland, Australia: clinical and molecular aspects.
Adam Stewart, Sanmarie Schlebusch, Susan Vlack, Jamie McMahon, Mitchell Sullivan, Alyssa Pyke

Med J Aust· March 2023

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Locally acquired lymphocytic choriomeningitis virus infections in South-East Queensland: an outbreak of a pathogen rarely described in Australia.
Luke Aaron, Jamie McMahon, Carmel Taylor, Alyssa T Pyke, Anna Brischetto

Intern Med J· August 2022

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Genome-scale molecular and phylogenetic characterization of Middle Point orbiviruses from Australia.
Kalpana Agnihotri, Jane Oakey, Craig Smith, Richard Weir, Alyssa Pyke

J Gen Virol· December 2021

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Uncovering the genetic diversity within the virome and isolation of new viruses from this highly urbanised and invasive mosquito.
Alyssa T Pyke, Martin A Shivas, Jonathan M Darbro, Michael B Onn, Petrina H Johnson

Virus Evol· September 2021

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Re-defining the dengue-receptive area of Queensland after the 2019 dengue outbreak in Rockhampton.
Jacina Walker, Alyssa Pyke, Paul Florian, Rachael M Rodney Harris, Gulam Khandaker

Med J Aust· August 2021

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A versatile reverse genetics platform for SARS-CoV-2 and other positive-strand RNA viruses.
Alberto A Amarilla, Julian D J Sng, Rhys Parry, Joshua M Deerain, James R Potter, Alyssa Pyke

Nat Commun· June 2021

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Re-emergence of dengue virus in regional Queensland: 2019 dengue virus outbreak in Rockhampton, Central Queensland, Australia.
Jacina Walker, Alyssa Pyke, Paul Florian, Fred Moore, Nicolas Smoll

Commun Dis Intell (2018)· June 2021

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Replication Kinetics of B.1.351 and B.1.1.7 SARS-CoV-2 Variants of Concern Including Assessment of a B.1.1.7 Mutant Carrying a Defective ORF7a Gene.
Alyssa T Pyke, Neelima Nair, Andrew F van den Hurk, Peter Burtonclay, Son Nguyen

Viruses· June 2021

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Infection, Dissemination, and Replication of Urban and Sylvatic Strains of Dengue Virus Type 2 (Flaviviridae: Flavivirus) in Australian Aedes aegypti (Diptera: Culicidae).
Sonja Hall-Mendelin, Alyssa T Pyke, Ana L Ramirez, Kyran M Staunton, Peter Burtonclay

J Med Entomol· May 2021

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Temperature modulates immune gene expression in mosquitoes during arbovirus infection.
B M C Randika Wimalasiri-Yapa, Roberto A Barrero, Liesel Stassen, Louise M Hafner, Elizabeth A McGraw, Alyssa T Pyke

Open Biol· January 2021

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Metagenomic Analysis of the Virome of Mosquito Excreta.
Ana L Ramírez, Agathe M G Colmant, David Warrilow, Bixing Huang, Alyssa T Pyke

mSphere· September 2020

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Antiviral Nanostructured Surfaces Reduce the Viability of SARS-CoV-2.
Jafar Hasan, Alyssa Pyke, Neelima Nair, Tejasri Yarlagadda, Geoffrey Will

ACS Biomater Sci Eng· September 2020

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A Case of Japanese Encephalitis with a Fatal Outcome in an Australian Who Traveled from Bali in 2019.
Alyssa T Pyke, Keat Choong, Frederick Moore, Sanmarié Schlebusch, Carmel Taylor

Trop Med Infect Dis· August 2020

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Genome Sequences of Chikungunya Virus Strains from Bangladesh and Thailand.
Alyssa T Pyke, Jamie McMahon, Peter Burtonclay, Neelima Nair, Amanda De Jong

Microbiol Resour Announc· January 2020

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Epidemiologic, Entomologic, and Virologic Factors of the 2014-15 Ross River Virus Outbreak, Queensland, Australia.
Cassie C Jansen, Martin A Shivas, Fiona J May, Alyssa T Pyke, Michael B Onn

Emerg Infect Dis· December 2019

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Erratum: Pyke, A.T. et al. On the Home Front: Specialized Reference Testing for Dengue in the Australasian Region. 2018, , 75.
Alyssa T Pyke, Wendy Gunn, Carmel Taylor, Ian M Mackay, Jamie McMahon

Trop Med Infect Dis· October 2019

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Chikungunya Virus Transmission at Low Temperature by Mosquitoes.
B M C Randika Wimalasiri-Yapa, Liesel Stassen, Wenbiao Hu, Laith Yakob, Elizabeth A McGraw, Alyssa T Pyke

Pathogens· September 2019

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Japanese Encephalitis Virus in Australia: From Known Known to Known Unknown.
Andrew F van den Hurk, Alyssa T Pyke, John S Mackenzie, Sonja Hall-Mendelin, Scott A Ritchie

Trop Med Infect Dis· February 2019

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