Publications by authors named "Amanda Tse"

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Improving the solubility of pseudo-hydrophobic chemicals through co-crystal formulation.
Isis Janilkarn-Urena, Amanda Tse, Jieye Lin, Bliss Tafolla-Aguirre, Alina Idrissova

PNAS Nexus· January 2025

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Monoaminergic neurotransmitters are bimodal effectors of tau aggregation.
Xinmin Chang, Amanda M Tse, Marina Fayzullina, Angela Albanese, Minchan Kim

Sci Adv· January 2025

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Interrogating Regulatory Mechanisms in Signaling Proteins by Allosteric Inhibitors and Activators: A Dynamic View Through the Lens of Residue Interaction Networks.
Lindy Astl, Amanda Tse, Gennady M Verkhivker

Adv Exp Med Biol· November 2019

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Dissecting Structure-Encoded Determinants of Allosteric Cross-Talk between Post-Translational Modification Sites in the Hsp90 Chaperones.
Gabrielle Stetz, Amanda Tse, Gennady M Verkhivker

Sci Rep· May 2018

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Ensemble-based modeling and rigidity decomposition of allosteric interaction networks and communication pathways in cyclin-dependent kinases: Differentiating kinase clients of the Hsp90-Cdc37 chaperone.
Gabrielle Stetz, Amanda Tse, Gennady M Verkhivker

PLoS One· December 2017

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Exploring Molecular Mechanisms of Paradoxical Activation in the BRAF Kinase Dimers: Atomistic Simulations of Conformational Dynamics and Modeling of Allosteric Communication Networks and Signaling Pathways.
Amanda Tse, Gennady M Verkhivker

PLoS One· June 2017

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Design, Synthesis, and Evaluation of Dasatinib-Amino Acid and Dasatinib-Fatty Acid Conjugates as Protein Tyrosine Kinase Inhibitors.
Rakesh K Tiwari, Alex Brown, Neda Sadeghiani, Amir Nasrolahi Shirazi, Jared Bolton, Amanda Tse

ChemMedChem· January 2017

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Molecular Determinants Underlying Binding Specificities of the ABL Kinase Inhibitors: Combining Alanine Scanning of Binding Hot Spots with Network Analysis of Residue Interactions and Coevolution.
Amanda Tse, Gennady M Verkhivker

PLoS One· May 2016

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Molecular Dynamics Simulations and Structural Network Analysis of c-Abl and c-Src Kinase Core Proteins: Capturing Allosteric Mechanisms and Communication Pathways from Residue Centrality.
Amanda Tse, Gennady M Verkhivker

J Chem Inf Model· August 2015

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