Publications by authors named "Andrew D Yates"

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The IPD-IMGT/HLA database: recent developments in sequence submission.
Dominic J Barker, Richard H L Natarajan, Michael A Cooper, Sebastian J F Hopper, Andrew D Yates

Nucleic Acids Res· November 2025

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Ensembl 2026.
Andrew D Yates, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes

Nucleic Acids Res· November 2025

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Taming the reference genome jungle: the refget sequence collection standard.
Donald R Campbell, Timothee Cezard, Sveinung Gundersen, Andrew D Yates, Robert M Davies

bioRxiv· October 2025

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The 2024 IPD-MHC database update: a comprehensive resource for major histocompatibility complex studies.
Giuseppe Maccari, James Robinson, Dominic J Barker, Andrew D Yates, John A Hammond

Nucleic Acids Res· January 2025

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Ensembl 2025.
Sarah C Dyer, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, If Barnes, Andrew D Yates

Nucleic Acids Res· January 2025

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Ensembl 2024.
Peter W Harrison, M Ridwan Amode, Olanrewaju Austine-Orimoloye, Andrey G Azov, Matthieu Barba, Andrew D Yates

Nucleic Acids Res· January 2024

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Ensembl 2023.
Fergal J Martin, M Ridwan Amode, Alisha Aneja, Olanrewaju Austine-Orimoloye, Andrey G Azov, Andrew D Yates

Nucleic Acids Res· January 2023

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Development and application of a computable genotype model in the GA4GH Variation Representation Specification.
Wesley Goar, Lawrence Babb, Srikar Chamala, Melissa Cline, Robert R Freimuth, Andrew D Yates

Pac Symp Biocomput· December 2022

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From biomedical cloud platforms to microservices: next steps in FAIR data and analysis.
Nathan C Sheffield, Vivien R Bonazzi, Philip E Bourne, Tony Burdett, Timothy Clark, Andrew D Yates

Sci Data· September 2022

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Annotating and prioritizing genomic variants using the Ensembl Variant Effect Predictor-A tutorial.
Sarah E Hunt, Benjamin Moore, Ridwan M Amode, Irina M Armean, Diana Lemos, Andrew D Yates

Hum Mutat· August 2022

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The Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 data.
Nishadi H De Silva, Jyothish Bhai, Marc Chakiachvili, Bruno Contreras-Moreira, Carla Cummins, Andrew D Yates

Nucleic Acids Res· January 2022

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PHI-base in 2022: a multi-species phenotype database for Pathogen-Host Interactions.
Martin Urban, Alayne Cuzick, James Seager, Valerie Wood, Kim Rutherford, Andrew D Yates

Nucleic Acids Res· January 2022

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Ensembl 2022.
Fiona Cunningham, James E Allen, Jamie Allen, Jorge Alvarez-Jarreta, M Ridwan Amode, Andrew D Yates

Nucleic Acids Res· January 2022

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Ensembl Genomes 2022: an expanding genome resource for non-vertebrates.
Andrew D Yates, James Allen, Ridwan M Amode, Andrey G Azov, Matthieu Barba

Nucleic Acids Res· January 2022

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Refget: standardized access to reference sequences.
Andrew D Yates, Jeremy Adams, Somesh Chaturvedi, Robert M Davies, Matthew Laird

Bioinformatics· December 2021

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GA4GH: International policies and standards for data sharing across genomic research and healthcare.
Heidi L Rehm, Angela J H Page, Lindsay Smith, Jeremy B Adams, Gil Alterovitz, Andrew D Yates

Cell Genom· November 2021

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The GA4GH Variation Representation Specification: A computational framework for variation representation and federated identification.
Alex H Wagner, Lawrence Babb, Gil Alterovitz, Michael Baudis, Matthew Brush, Andrew D Yates

Cell Genom· November 2021

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A compendium of uniformly processed human gene expression and splicing quantitative trait loci.
Nurlan Kerimov, James D Hayhurst, Kateryna Peikova, Jonathan R Manning, Peter Walter, Andrew D Yates

Nat Genet· September 2021

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Ensembl 2021.
Kevin L Howe, Premanand Achuthan, James Allen, Jamie Allen, Jorge Alvarez-Jarreta, Andrew D Yates

Nucleic Acids Res· January 2021

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Pervasive lesion segregation shapes cancer genome evolution.
Sarah J Aitken, Craig J Anderson, Frances Connor, Oriol Pich, Vasavi Sundaram, Andrew D Yates

Nature· July 2020

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Ensembl Genomes 2020-enabling non-vertebrate genomic research.
Kevin L Howe, Bruno Contreras-Moreira, Nishadi De Silva, Gareth Maslen, Wasiu Akanni, Andrew D Yates

Nucleic Acids Res· January 2020

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Ensembl 2020.
Andrew D Yates, Premanand Achuthan, Wasiu Akanni, James Allen, Jamie Allen

Nucleic Acids Res· January 2020

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Collaborative Annotation Redefines Gene Sets for Crucial Phytopathogens.
Helder Pedro, Andrew D Yates, Paul J Kersey, Nishadi H De Silva

Front Microbiol· November 2019

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Ensembl 2019.
Fiona Cunningham, Premanand Achuthan, Wasiu Akanni, James Allen, M Ridwan Amode, Andrew D Yates

Nucleic Acids Res· January 2019

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Eleven quick tips to build a usable REST API for life sciences.
Aleksandra Tarkowska, Denise Carvalho-Silva, Charles E Cook, Edd Turner, Robert D Finn, Andrew D Yates

PLoS Comput Biol· December 2018

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