Publications by authors named "Andrew Janowczyk"

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Computational Characterization of Lymphocyte Topology on Whole Slide Images of Glomerular Diseases.
Xiang Li, Manav Shah, Qian Liu, Jin Zhou, Gina Sotolongo, Andrew R Janowczyk

J Am Soc Nephrol· October 2025

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Standardized Reporting of Core Needle Biopsy Tortuosity.
Jackson Jacobs, Dan Wiener, Tilak Pathak, Xavier Farré, Tuomas Mirtti, Andrew Janowczyk

Arch Pathol Lab Med· October 2025

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Interactive visualization of kidney micro-compartmental segmentations and associated pathomics on whole slide images.
Mark S Keller, Nicholas Lucarelli, Yijiang Chen, Samuel Border, Andrew Janowczyk

ArXiv· October 2025

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Clinical Relevance of Computationally Derived Attributes of Arteries and Arterioles in focal segmental glomerulosclerosis and minimal change disease.
Jin Zhou, Dawit Demeke, Xiang Li, Timothy Dinh, Christopher O'Connor, Andrew R Janowczyk

medRxiv· October 2025

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Glomerular Segmentation, Classification, and Pathomic Feature-based Prediction of Clinical Outcomes in Minimal Change Disease and Focal Segmental Glomerulosclerosis.
Akhil Ambekar, Maryam Roohian, Qian Liu, Bangchen Wang, Fan Fan, Andrew Janowczyk

medRxiv· October 2025

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Using HistoQC to predict disagreement on human epidermal growth factor receptor 2 (HER2) assessment.
Laura Verzellesi, Moira Ragazzi, Andrea Botti, Giacomo Santandrea, Andrew Janowczyk

Phys Med· September 2025

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Clinical relevance of computationally derived tubular features and their spatial relationships with the interstitial microenvironment in minimal change disease/focal segmental glomerulosclerosis.
Fan Fan, Qian Liu, Jarcy Zee, Takaya Ozeki, Dawit Demeke, Andrew Janowczyk

Kidney Int· August 2025

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Chronic Changes on Kidney Histology by a Multiclass Artificial Intelligence Model.
Aleksandar Denic, Muhammad S Asghar, Lucas Stetzik, Austin Reynolds, Jaidip M Jagtap, Andrew R Janowczyk

Kidney Int Rep· August 2025

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Computer-aided tumor cell fraction (TCF) estimation by medical students, residents, and pathologists improves inter-observer agreement while highlighting the risk of automation bias.
Ana Leni Frei, Amjad Khan, Raphaël Oberson, Stefan Reinhard, Yara Banz, Andrew Janowczyk

Virchows Arch· July 2025

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Correction: Impact of Tissue Thickness on Computational Quantification of Features in Whole Slide Images for Diagnostic Pathology.
Manav Shah, António Polónia, Mónica Curado, João Vale, Andrew Janowczyk

Endocr Pathol· July 2025

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Impact of Tissue Thickness on Computational Quantification of Features in Whole Slide Images for Diagnostic Pathology.
Manav Shah, António Polónia, Mónica Curado, João Vale, Andrew Janowczyk

Endocr Pathol· April 2025

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Computational characterization of lymphocyte topology on whole slide images of glomerular diseases.
Xiang Li, Manav Shah, Qian Liu, Jin Zhou, Gina Sotolongo, Andrew R Janowczyk

medRxiv· April 2025

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Differentiating Separate Primary Lung Adenocarcinomas From Intrapulmonary Metastases With Emphasis on Pathological and Molecular Considerations: Recommendations From the International Association for the Study of Lung Cancer Pathology Committee.
Teh-Ying Chou, Sanja Dacic, Ignacio Wistuba, Mary Beth Beasley, Sabina Berezowska, Andrew Janowczyk

J Thorac Oncol· March 2025

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Novel Scalar-on-matrix Regression for Unbalanced Feature Matrices.
Jeremy Rubin, Fan Fan, Laura Barisoni, Andrew R Janowczyk, Jarcy Zee

Stat Biosci· March 2025

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Glomerular and Nephron Size and Kidney Disease Outcomes: A Comparison of Manual Versus Deep Learning Methods in Kidney Pathology.
Jaidip M Jagtap, Andrew R Janowczyk, Yijiang Chen, Afsana A Shaik, Aidan F Mullan

Kidney Med· January 2025

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Clinical Relevance of Computational Pathology Analysis of Interplay Between Kidney Microvasculature and Interstitial Microenvironment.
Yijiang Chen, Bangchen Wang, Dawit Demeke, Fan Fan, Celine Berthier, Andrew Janowczyk

Clin J Am Soc Nephrol· December 2024

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Computational staining of CD3/CD20 positive lymphocytes in human tissues with experimental confirmation in a genetically engineered mouse model.
Xiang Li, Casey C Heirman, Ashlyn G Rickard, Gina Sotolongo, Rico Castillo, Andrew Janowczyk

Front Immunol· November 2024

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Characterization of arteriosclerosis based on computer-aided measurements of intra-arterial thickness.
Jin Zhou, Xiang Li, Dawit Demeke, Timothy A Dinh, Yingbao Yang, Andrew R Janowczyk

J Med Imaging (Bellingham)· September 2024

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Swiss digital pathology recommendations: results from a Delphi process conducted by the Swiss Digital Pathology Consortium of the Swiss Society of Pathology.
Andrew Janowczyk, Inti Zlobec, Cedric Walker, Sabina Berezowska, Viola Huschauer

Virchows Arch· July 2024

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Neoantigen-specific T-cell response after donor lymphocyte infusion associates with favorable outcome in a patient with i(12p) germ cell tumor, acute leukemia and sarcoma of the same clonal origin.
Vassilis Genoud, Valérie Dutoit, Nhu-Nam Tran Thang, Andrew Janowczyk, Thomas McKee

Haematologica· July 2024

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CohortFinder: an open-source tool for data-driven partitioning of digital pathology and imaging cohorts to yield robust machine-learning models.
Fan Fan, Georgia Martinez, Thomas DeSilvio, John Shin, Yijiang Chen, Andrew Janowczyk

Npj Imaging· July 2024

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Clinical Relevance of Computationally Derived Tubular Features: Spatial Relationships and the Development of Tubulointerstitial Scarring in MCD/FSGS.
Fan Fan, Qian Liu, Jarcy Zee, Takaya Ozeki, Dawit Demeke, Andrew Janowczyk

medRxiv· July 2024

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PatchSorter: a high throughput deep learning digital pathology tool for object labeling.
Cédric Walker, Tasneem Talawalla, Robert Toth, Akhil Ambekar, Kien Rea, Andrew Janowczyk

NPJ Digit Med· June 2024

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An end-to-end workflow for nondestructive 3D pathology.
Kevin W Bishop, Lindsey A Erion Barner, Qinghua Han, Elena Baraznenok, Lydia Lan, Andrew Janowczyk

Nat Protoc· April 2024

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The prognostic value of tumor-stroma ratio and a newly developed computer-aided quantitative analysis of routine H&E slides in high-grade serous ovarian cancer.
Lilian van Wagensveld, Cedric Walker, Kerstin Hahn, Joyce Sanders, Roy Kruitwagen, Andrew Janowczyk

Res Sq· November 2023

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