Publications by authors named "Anna Ritz"

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ProteinWeaver: A webtool to visualize ontology-annotated protein networks.
Oliver Anderson, Altaf Barelvi, Aden O'Brien, Ainsley Norman, Iris Jan, Anna Ritz

PLoS One· September 2025

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CNB-MAC 2023 Special Issue.
Anna Ritz

J Comput Biol· July 2025

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GRPhIN: graphlet characterization of regulatory and physical interaction networks.
Altaf Barelvi, Oliver Anderson, Anna Ritz

Bioinform Adv· July 2025

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Posttraumatic stress disorder symptomology as measured by PCL-5 and its relationships to resilience, hostility and stress among paramedics and social professionals.
Anna Alexandrov, Nóra Román, Petra Kovács, Anna Ritz, Mónika Kissné Viszket

Stress Health· October 2024

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Current and future directions in network biology.
Marinka Zitnik, Michelle M Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Anna Ritz

Bioinform Adv· August 2024

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From network analysis to experimental validation: identification of regulators of non-muscle myosin II contractility using the folded-gastrulation signaling pathway.
Andy Zhao, Sophia Varady, Madelyn O'Kelley-Bangsberg, Vicki Deng, Amy Platenkamp, Anna Ritz

BMC Mol Cell Biol· October 2023

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Identification of disease modules using higher-order network structure.
Pramesh Singh, Hannah Kuder, Anna Ritz

Bioinform Adv· October 2023

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Growing Directed Acyclic Graphs: Optimization Functions for Pathway Reconstruction Algorithms.
Tunç Başar Köse, Jiarong Li, Anna Ritz

J Comput Biol· July 2023

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Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022).
Hyundoo Jeong, José Lugo-Martinez, Anna Ritz, Yijie Wang, Chi Zhang

J Comput Biol· July 2023

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Transformer Neural Networks for Protein Family and Interaction Prediction Tasks.
Ananthan Nambiar, Simon Liu, Maeve Heflin, John Malcolm Forsyth, Sergei Maslov, Anna Ritz

J Comput Biol· January 2023

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Reconciling Signaling Pathway Databases with Network Topologies.
Tobias Rubel, Pramesh Singh, Anna Ritz

Pac Symp Biocomput· January 2022

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Graphery: interactive tutorials for biological network algorithms.
Heyuan Zeng, Jinbiao Zhang, Gabriel A Preising, Tobias Rubel, Pramesh Singh, Anna Ritz

Nucleic Acids Res· July 2021

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Ten simple rules for attending your first conference.
Elizabeth Leininger, Kelly Shaw, Niema Moshiri, Kelly Neiles, Getiria Onsongo, Anna Ritz

PLoS Comput Biol· July 2021

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Cabozantinib and dasatinib synergize to induce tumor regression in non-clear cell renal cell carcinoma.
Hui-Wen Lue, Daniel S Derrick, Soumya Rao, Ahna Van Gaest, Larry Cheng, Anna Ritz

Cell Rep Med· May 2021

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The Rab GAP RN-tre cross-talks with the Rho1 signaling pathway to regulate nonmuscle myosin II localization and function.
Amy Platenkamp, Elizabeth Detmar, Liz Sepulveda, Anna Ritz, Stephen L Rogers

Mol Biol Cell· October 2020

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Distance measures for tumor evolutionary trees.
Zach DiNardo, Kiran Tomlinson, Anna Ritz, Layla Oesper

Bioinformatics· April 2020

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MsPAC: a tool for haplotype-phased structural variant detection.
Oscar L Rodriguez, Anna Ritz, Andrew J Sharp, Ali Bashir

Bioinformatics· February 2020

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Integrating protein localization with automated signaling pathway reconstruction.
Ibrahim Youssef, Jeffrey Law, Anna Ritz

BMC Bioinformatics· December 2019

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Hypergraph-based connectivity measures for signaling pathway topologies.
Nicholas Franzese, Adam Groce, T M Murali, Anna Ritz

PLoS Comput Biol· October 2019

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Invasive ductal carcinoma detected within a fibroadenolipoma through digital breast tomosynthesis.
Serafino Forte, Anna Ritz, Rahel Kubik-Huch, Cornelia Leo

Acta Radiol Open· July 2019

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Network-based prediction of polygenic disease genes involved in cell motility.
Miriam Bern, Alexander King, Derek A Applewhite, Anna Ritz

BMC Bioinformatics· June 2019

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A Cell-based Assay to Investigate Non-muscle Myosin II Contractility via the Folded-gastrulation Signaling Pathway in Drosophila S2R+ Cells.
Kimberly A Peters, Elizabeth Detmar, Liz Sepulveda, Corrina Del Valle, Ruth Valsquier, Anna Ritz

J Vis Exp· August 2018

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Pathway Analysis with Signaling Hypergraphs.
Anna Ritz, Brendan Avent, T M Murali

IEEE/ACM Trans Comput Biol Bioinform· May 2018

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GraphSpace: stimulating interdisciplinary collaborations in network biology.
Aditya Bharadwaj, Divit P Singh, Anna Ritz, Allison N Tegge, Christopher L Poirel

Bioinformatics· October 2017

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Metabolic reprogramming ensures cancer cell survival despite oncogenic signaling blockade.
Hui-Wen Lue, Jennifer Podolak, Kevin Kolahi, Larry Cheng, Soumya Rao, Anna Ritz

Genes Dev· October 2017

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