Publications by authors named "Anthony Bolger"

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Helixer: ab initio prediction of primary eukaryotic gene models combining deep learning and a hidden Markov model.
Felix Holst, Anthony M Bolger, Felicitas Kindel, Christopher Günther, Janina Maß, Marie E Bolger

Nat Methods· November 2025

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Chromosome-level genome assemblies of Thai cassava ecotypes (Manihot esculenta & Manihot glaziovii).
Sebastian Beier, Marie Elizabeth Bolger, Yindee Chanvivattana, Anthony Michael Bolger, Maximilian Heinrich-Wilhelm Schmidt

Sci Data· September 2025

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Challenges and solutions to complex data governance issues in cross-national, cross-sectoral, multidisciplinary real world health research: a descriptive overview.
Miriam Galvin, Mark Heverin, Éanna Mac Domhnaill, Robert Mcfarlane, Dara Meldrum, Anthony Bolger

Amyotroph Lateral Scler Frontotemporal Degener· May 2025

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In-depth exploration of the genomic diversity in tea varieties based on a newly constructed pangenome of Camellia sinensis.
Arslan Tariq, Minghui Meng, Xiaohui Jiang, Anthony Bolger, Sebastian Beier

Plant J· August 2024

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Data and Process Harmonisation of Multi-National, Multi-Site Research Data.
Jonathan Turner, Sinéad Impey, Frances Gibbons, Anthony Bolger, Gaye Stephens

Stud Health Technol Inform· August 2024

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PRECISION ALS-an integrated pan European patient data platform for ALS.
Robert McFarlane, Miriam Galvin, Mark Heverin, Éanna Mac Domhnaill, Deirdre Murray, Anthony Bolger

Amyotroph Lateral Scler Frontotemporal Degener· August 2023

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The Arabidopsis thaliana onset of leaf death 12 mutation in the lectin receptor kinase P2K2 results in an autoimmune phenotype.
Liming Zhao, Hao-Jie Wang, Patricia Dalcin Martins, Joost T van Dongen, Anthony M Bolger

BMC Plant Biol· June 2023

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Genetic and molecular characterization of multicomponent resistance of against allicin.
Jan Borlinghaus, Anthony Bolger, Christina Schier, Alexander Vogel, Björn Usadel

Life Sci Alliance· May 2020

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Transcriptome Analysis of Durum Wheat Flag Leaves Provides New Insights Into the Regulatory Response to Elevated CO and High Temperature.
Rubén Vicente, Anthony M Bolger, Rafael Martínez-Carrasco, Pilar Pérez, Elena Gutiérrez

Front Plant Sci· December 2019

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Isolation of Open Chromatin Identifies Regulators of Systemic Acquired Resistance.
Stephani Baum, Eva-Maria Reimer-Michalski, Anthony Bolger, Andrea J Mantai, Vladimir Benes

Plant Physiol· October 2019

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MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis.
Rainer Schwacke, Gabriel Y Ponce-Soto, Kirsten Krause, Anthony M Bolger, Borjana Arsova, Marie E Bolger

Mol Plant· June 2019

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Fluctuating Light Interacts with Time of Day and Leaf Development Stage to Reprogram Gene Expression.
Trang Schneider, Anthony Bolger, Jürgen Zeier, Sabine Preiskowski, Vladimir Benes

Plant Physiol· April 2019

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Computational aspects underlying genome to phenome analysis in plants.
Anthony M Bolger, Hendrik Poorter, Kathryn Dumschott, Marie E Bolger, Daniel Arend

Plant J· January 2019

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Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris.
Alexander Vogel, Rainer Schwacke, Alisandra K Denton, Björn Usadel, Julien Hollmann, Anthony Bolger, Marie E Bolger

Nat Commun· June 2018

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Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N but may denitrify.
Laura W Dijkhuizen, Paul Brouwer, Henk Bolhuis, Gert-Jan Reichart, Nils Koppers, Anthony M Bolger

New Phytol· January 2018

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De Novo Assembly of a New Accession Using Nanopore Sequencing.
Maximilian H-W Schmidt, Alexander Vogel, Alisandra K Denton, Benjamin Istace, Alexandra Wormit, Marie E Bolger, Anthony M Bolger

Plant Cell· October 2017

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Tomato facultative parthenocarpy results from SlAGAMOUS-LIKE 6 loss of function.
Chen Klap, Ester Yeshayahou, Anthony M Bolger, Tzahi Arazi, Suresh K Gupta

Plant Biotechnol J· May 2017

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Metabolic Adaptation, a Specialized Leaf Organ Structure and Vascular Responses to Diurnal N Fixation by Sustain the Astonishing Productivity of Ferns without Nitrogen Fertilizer.
Paul Brouwer, Andrea Bräutigam, Valerie A Buijs, Anne O E Tazelaar, Adrie van der Werf, Anthony Bolger

Front Plant Sci· March 2017

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Streptomyces thermoautotrophicus does not fix nitrogen.
Drew MacKellar, Lucas Lieber, Jeffrey S Norman, Anthony Bolger, Cory Tobin

Sci Rep· February 2016

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The genome of the stress-tolerant wild tomato species Solanum pennellii.
Anthony Bolger, Federico Scossa, Marie E Bolger, Christa Lanz, Florian Maumus

Nat Genet· September 2014

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Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel

Bioinformatics· August 2014

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Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato.
Daniel Koenig, José M Jiménez-Gómez, Seisuke Kimura, Daniel Fulop, Daniel H Chitwood, Anthony Bolger

Proc Natl Acad Sci U S A· July 2013

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Evolution of a complex locus for terpene biosynthesis in solanum.
Yuki Matsuba, Thuong T H Nguyen, Krystle Wiegert, Vasiliki Falara, Eliana Gonzales-Vigil, Anthony M Bolger

Plant Cell· June 2013

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Identification of candidate genes for phenolics accumulation in tomato fruit.
Antonio Di Matteo, Valentino Ruggieri, Adriana Sacco, Maria Manuela Rigano, Filomena Carriero, Anthony Bolger

Plant Sci· May 2013

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Dual resistance of melon to Fusarium oxysporum races 0 and 2 and to Papaya ring-spot virus is controlled by a pair of head-to-head-oriented NB-LRR genes of unusual architecture.
Yariv Brotman, Michael Normantovich, Zachi Goldenberg, Zvi Zvirin, Irina Kovalski, Anthony M Bolger

Mol Plant· January 2013

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