Publications by authors named "Ashley Sidebottom"

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Lantibiotic-producing bacteria impact microbiome resilience and colonization resistance.
Cody G Cole, Zhenrun J Zhang, Shravan R Dommaraju, Qiwen Dong, Rosemary L Pope, Ashley M Sidebottom

Cell Host Microbe· December 2025

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Gut bacteria metabolize natural and synthetic steroid hormones via the reductive OsrABC pathway.
Christian Jacoby, Kaylie Scorza, Lia Ecker, Paola Nol Bernardino, Alexander S Little, Ashley M Sidebottom

Cell Host Microbe· November 2025

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Gut Bacteria Metabolize Natural and Synthetic Steroid Hormones via the Reductive OsrABC Pathway.
Christian Jacoby, Kaylie Scorza, Lia Ecker, Paola Nol Bernardino, Alexander S Little, Ashley M Sidebottom

bioRxiv· September 2025

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DNA-utilization loci enable exogenous DNA metabolism in gut Bacteroidales.
Deepti Sharan, Agnieszka Nurek, Joshua Stemczynski, Kristof Turan, Alexander S Little, Ashley M Sidebottom

Proc Natl Acad Sci U S A· September 2025

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Microbiome mismatches from microbiota transplants lead to persistent off-target metabolic and immunomodulatory effects.
Orlando DeLeon, Mora Mocanu, Alan Tan, Ashley M Sidebottom, Jason Koval

Cell· July 2025

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Gut microbes mediate the synergistic effects of dietary cholesterol and saturated fat in driving fibrosing MASH.
Jake B Hermanson, Samar A Tolba, Md Amran Gazi, Evan A Chrisler, Manpreet Kaur, Ashley M Sidebottom

bioRxiv· July 2025

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Circulating molecules reflect imaging biomarkers of hemorrhage in cerebral cavernous malformations.
Stephanie F Hage, Dehua E Bi, Serena Kinkade, Diana Vera Cruz, Abhinav Srinath, Ashley Sidebottom

J Cereb Blood Flow Metab· June 2025

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Author Correction: Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration.
Alexander S Little, Isaac T Younker, Matthew S Schechter, Paola Nol Bernardino, Raphaël Méheust, Ashley M Sidebottom

Nat Microbiol· June 2025

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Fecal metabolite profiling identifies critically ill patients with increased 30-day mortality.
Alexander P de Porto, Nicholas P Dylla, Matthew Stutz, Huaiying Lin, Maryam Khalid, Ashley Sidebottom

Sci Adv· June 2025

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Fecal Butyrate and Deoxycholic Acid Concentrations Correlate With Mortality in Patients With Liver Disease.
Matthew A Odenwald, Ramanujam Ramaswamy, Huaiying Lin, Christopher Lehmann, Angelica Moran, Ashley M Sidebottom

Gastro Hep Adv· May 2025

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Lantibiotic-producing bacteria impact microbiome resilience and colonization resistance.
Cody G Cole, Zhenrun J Zhang, Shravan R Dommaraju, Qiwen Dong, Rosemary L Pope, Ashley M Sidebottom

bioRxiv· May 2025

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Fecal Microbial Profiles and Short-Chain Fatty Acid/Bile Acid Metabolomics in Patients With Age-Related Macular Degeneration: A Pilot Study.
Zaid Parekh, Jason Xiao, Amir Mani, Quadis Evans, Christopher Phung, Ashley M Sidebottom

Invest Ophthalmol Vis Sci· April 2025

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Enterobactin inhibits microbiota-dependent activation of AhR to promote bacterial sepsis in mice.
Robert C Keskey, Jason Xiao, Sanjiv Hyoju, Adam Lam, Daniel Kim, Ashley M Sidebottom

Nat Microbiol· February 2025

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Subspecies phylogeny in the human gut revealed by co-evolutionary constraints across the bacterial kingdom.
Benjamin A Doran, Robert Y Chen, Hannah Giba, Vivek Behera, Bidisha Barat, Ashley Sidebottom

Cell Syst· February 2025

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Protection against Clostridioides difficile disease by a naturally avirulent strain.
Qiwen Dong, Stephen Harper, Emma McSpadden, Sophie S Son, Marie-Maude Allen, Ashley M Sidebottom

Cell Host Microbe· January 2025

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Comprehensive analyses of a large human gut Bacteroidales culture collection reveal species- and strain-level diversity and evolution.
Zhenrun J Zhang, Cody G Cole, Michael J Coyne, Huaiying Lin, Nicholas Dylla, Ashley M Sidebottom

Cell Host Microbe· October 2024

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detoxification mechanism increases resilience of the gut environment.
Tanner G Richie, Hallie Wiechman, Carson Ingold, Leah Heeren, Abigail Kamke, Ashley M Sidebottom

bioRxiv· May 2024

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Protection against disease by a naturally avirulent strain.
Qiwen Dong, Stephen Harper, Emma McSpadden, Sophie S Son, Marie-Maude Allen, Ashley M Sidebottom

bioRxiv· May 2024

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Comprehensive analyses of a large human gut Bacteroidales culture collection reveal species and strain level diversity and evolution.
Zhenrun J Zhang, Cody G Cole, Michael J Coyne, Huaiying Lin, Nicholas Dylla, Ashley M Sidebottom

bioRxiv· March 2024

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Fecal metabolite profiling identifies liver transplant recipients at risk for postoperative infection.
Christopher J Lehmann, Nicholas P Dylla, Matthew Odenwald, Ravi Nayak, Maryam Khalid, Ashley M Sidebottom

Cell Host Microbe· January 2024

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Microbially catalyzed conjugation of GABA and tyramine to bile acids.
Michael W Mullowney, Aretha Fiebig, Matthew K Schnizlein, Mary McMillin, Amber R Rose, Ashley M Sidebottom

J Bacteriol· January 2024

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Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration.
Alexander S Little, Isaac T Younker, Matthew S Schechter, Paola Nol Bernardino, Raphaël Méheust, Ashley M Sidebottom

Nat Microbiol· January 2024

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An evolution-based framework for describing human gut bacteria.
Benjamin A Doran, Robert Y Chen, Hannah Giba, Vivek Behera, Bidisha Barat, Ashley Sidebottom

bioRxiv· December 2023

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Oral Metformin Inhibits Choroidal Neovascularization by Modulating the Gut-Retina Axis.
Jason Y Zhang, Jason Xiao, Bingqing Xie, Hugo Barba, Michael Boachie-Mensah, Ashley M Sidebottom

Invest Ophthalmol Vis Sci· December 2023

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Reduced immunomodulatory metabolite concentrations in peri-transplant fecal samples from heart allograft recipients.
Mark Dela Cruz, Huaiying Lin, Jiho Han, Emerald Adler, Jaye Boissiere, Ashley Sidebottom

Front Transplant· July 2023

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