Publications by authors named "Atul Upadhyay"

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Insights into amino acid usage patterns among allergenic and non-allergenic proteins to develop biomarkers for early detection of food-allergenic proteins.
Devvrat Prasad, Dibyalochan Mohanty, Ovais Shafiq Qadri, Vikas Handa, Atul Kumar Upadhyay

J Sci Food Agric· November 2025

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In silico approaches to identify therapeutic drug targets against COVID-19: a detailed review with a case study.
Tanmayee Basu, Atul Kumar Upadhyay

In Silico Pharmacol· October 2025

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In silico identification and structural insight of allergens in Pleurotus ostreatus.
Rashi Chugh, Vikas Handa, Atul Kumar Upadhyay

J Sci Food Agric· August 2025

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Factors associated with anemia among pregnant and lactating women during the COVID-19 pandemic in the targeted municipalities of five selected provinces in Nepal: a cross-sectional study.
Pratik Niraula, Atul Upadhyay, Sanjeev Kumar Karn, Roman Karki

BMC Public Health· July 2025

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Deciphering the structural dynamics of Argonaute (AGO)-mediated gene silencing of miR-21-5p, miR-221-3p, miR-126-3p, miR-34a-5p and their role as potential biomarkers in lung cancer.
Anmol Bhatia, Atul Kumar Upadhyay, Siddharth Sharma

Nucleosides Nucleotides Nucleic Acids· July 2025

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Analyzing the role of genetic variants in microRNAs and its role as a modulator towards Chronic Obstructive Pulmonary disease (COPD) susceptibility in North Indian population.
Anmol Bhatia, Atul Kumar Upadhyay, Kranti Garg, Vishal Chopra, Siddharth Sharma

Gene· June 2025

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Determination of glycaemic index of selected rice landraces of Nepal using INFOGEST model.
Sakul Rai, Dambar Bahadur Khadka, Atul Upadhyay, Basanta Kumar Rai

BMJ Nutr Prev Health· March 2025

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Luliconazole-niacinamide lipid nanocarrier laden gel for enhanced treatment of vaginal candidiasis: , , and preclinical insights.
Bhabani Sankar Satapathy, Ameeduzzafar Zafar, Musarrat Husain Warsi, Sritam Behera, Dibya Iochan Mohanty, Atul Kumar Upadhyay

RSC Adv· February 2025

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Allergic potential & molecular mechanism of skin sensitization of cinnamaldehyde under environmental UVB exposure.
Sunil Kumar Patel, Apeksha Vikram, Diksha Pathania, Rashi Chugh, Prakriti Gaur, Atul Kumar Upadhyay

Chemosphere· November 2024

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analysis of Diosmetin as an effective chemopreventive agent against prostate cancer: molecular docking, validation, dynamic simulation and pharmacokinetic prediction-based studies.
Sumit Sheoran, Swati Arora, Tanmayee Basu, Swati Negi, Naidu Subbarao, Atul Kumar Upadhyay

J Biomol Struct Dyn· October 2024

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In silico study of novel alpha tocopheroids as effective inhibitors of aldo-keto reductase 1c3 (AKR1C3) enzyme.
Tanmayee Basu, Atul Kumar Upadhyay

J Biomol Struct Dyn· September 2024

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Screening and analysis of single nucleotide polymorphism in the 3'-UTR microRNA target regions and its implications for lung tumorigenesis.
Anmol Bhatia, Atul Kumar Upadhyay, Siddharth Sharma

Pharmacogenomics· September 2024

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Natural autophagy activators: A promising strategy for combating photoaging.
Apeksha Vikram, Sunil Kumar Patel, Arshwinder Singh, Diksha Pathania, Ratan Singh Ray, Atul Kumar Upadhyay

Phytomedicine· September 2024

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Novel cost-effective design for bio-volatilization studies in photosynthetic microalgae exposed to arsenic with emphasis on growth and glutathione modulation.
Atul K Upadhyay, Shekhar Mallick, Ranjan Singh, Lav Singh, Nitesh Singh

Front Microbiol· June 2023

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Effects of fermentation time on the bioactive constituents of , a traditional fermented food of Nepal.
Nirat Katuwal, Bibek Raya, Roshan Dangol, Basanta Raj Adhikari, Yadav Kc, Atul Upadhyay

Heliyon· April 2023

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miRNAs are now starring in "No Time to Die: Overcoming the chemoresistance in cancer".
Anmol Bhatia, Atul Kumar Upadhyay, Siddharth Sharma

IUBMB Life· March 2023

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Design of a multi-epitope vaccine against the pathogenic fungi Candida tropicalis using an in silico approach.
Nahid Akhtar, Arshwinder Singh, Atul Kumar Upadhyay, M Amin-Ul Mannan

J Genet Eng Biotechnol· September 2022

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A Review of Chemistry and Pharmacology of Piperidine Alkaloids of Pinus and Related Genera.
Lav Singh, Atul K Upadhyay, Pooja Dixit, Arpit Singh, Divyanshu Yadav

Curr Pharm Biotechnol· May 2022

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Development, In-Vitro Characterization and Preclinical Evaluation of Esomeprazole-Encapsulated Proniosomal Formulation for the Enhancement of Anti-Ulcer Activity.
Dibyalochan Mohanty, Ameeduzzafar Zafar, Mohammed Jafar, Atul Kumar Upadhyay, Mohammad Akiful Haque

Molecules· April 2022

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Bioaccumulation and Toxicity of As in the Alga Chlorococcum sp.: Prospects for As Bioremediation.
Atul Kumar Upadhyay, Lav Singh, Ranjan Singh, D P Singh, Gauri Saxena

Bull Environ Contam Toxicol· March 2022

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Structural insights into the amino acid usage variations in the profilin gene family.
Bhupender Singh, Vijayalakshmi Ahanathapillai, Neeta Raj Sharma, Sadaf Jan, Ayan Roy, Atul Kumar Upadhyay

Amino Acids· March 2022

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Drummondin E and Flinderole B are potential inhibitors of RNA-dependent RNA polymerase of SARS-CoV-2: an study.
Nahid Akhtar, Himanshu Verma, O M Silkari, Atul K Upadhyay, Vikas Kaushik

BioTechnologia (Pozn)· March 2022

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T-cell epitope-based vaccine designing against Orthohantavirus: a causative agent of deadly cardio-pulmonary disease.
Amit Joshi, Nillohit Mitra Ray, Joginder Singh, Atul Kumar Upadhyay, Vikas Kaushik

Netw Model Anal Health Inform Bioinform· December 2021

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Screening of potent drug inhibitors against SARS-CoV-2 RNA polymerase: an in silico approach.
Sanjay Kumar Singh, Atul Kumar Upadhyay, M Sudhakara Reddy

3 Biotech· February 2021

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A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways.
Adwait G Joshi, K Harini, Iyer Meenakshi, K Mohamed Shafi, Shaik Naseer Pasha, Atul K Upadhyay

MethodsX· September 2020

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