Publications by authors named "Babar Usman"

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Machine Learning and CRISPR-Based Validation Elucidate OsWOX13 Involvement in Rice Heat Stress Tolerance and Flowering.
Muhammad Ikram, Muhammad Farhan, Behnam Derakhshani, Sunjeet Kumar, Naveed Khan, Babar Usman

Physiol Plant· December 2025

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Probing Cellular Landscapes in Plants via Single-Cell Transcriptomics.
Babar Usman, Naveed Khan, Yiming Wang, Ravi Gupta, Soon Wook Kwon

Plant Sci· December 2025

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Machine learning and functional validation identify OsRAV11/12 as negative regulators of drought tolerance and early flowering in rice.
You Zhang, Muhammad Ikram, Naveed Khan, Neng Zhao, Behnam Derakhshani, Babar Usman

Int J Biol Macromol· November 2025

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Chromosome-level genome assembly of the autotetraploid yellow pitaya provides novel insights into evolution of trait patterning in pitaya species with different ploidy.
Qamar U Zaman, Ali Raza, Liu Hui, Mian Faisal Nazir, Vanika Garg, Babar Usman

Genome Biol· August 2025

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Comparative Physiological and Transcriptomics Profiling Provides Integrated Insight into Melatonin Mediated Salt and Copper Stress Tolerance in L.
Darya Khan, Xin Yang, Gong He, Raja Asad Ali Khan, Babar Usman

Plants (Basel)· December 2024

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SURGICAL SITE INFECTION WITH EXTREME DRUG-RESISTANT ACINETOBACTER BAUMANII: A WAKE-UP CALL!
Faraz Waheed, Afaq Saeed Khan, Usman Babar, Manahil Saeed Khan

J Ayub Med Coll Abbottabad· November 2024

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Transcriptome Profiles Reveal Key Regulatory Networks during Single and Multifactorial Stresses Coupled with Melatonin Treatment in Pitaya ( L.).
Aamir Ali Khokhar, Liu Hui, Darya Khan, Zhang You, Qamar U Zaman, Babar Usman

Int J Mol Sci· August 2024

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An ATP-binding cassette transporter, OsABCB24, is involved in female gametophyte development and early seed growth in rice.
Van Ngoc Tuyet Nguyen, Babar Usman, Eui-Jung Kim, Su-Hyeon Shim, Jong-Seong Jeon

Physiol Plant· May 2024

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CRISPR enables sustainable cereal production for a greener future.
Sunny Ahmar, Babar Usman, Goetz Hensel, Ki-Hong Jung, Damian Gruszka

Trends Plant Sci· February 2024

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Recent Molecular Aspects and Integrated Omics Strategies for Understanding the Abiotic Stress Tolerance of Rice.
Babar Usman, Behnam Derakhshani, Ki-Hong Jung

Plants (Basel)· May 2023

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Detection of QTLs Regulating Six Agronomic Traits of Rice Based on Chromosome Segment Substitution Lines of Common Wild Rice ( Griff.) and Mapping of and .
Neng Zhao, Ruizhi Yuan, Babar Usman, Jiaming Qin, Jinlian Yang

Biomolecules· December 2022

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CRISPR/Cas-mediated editing of cis-regulatory elements for crop improvement.
Sumbul Saeed, Babar Usman, Su-Hyeon Shim, Shahid Ullah Khan, Sabzoi Nizamuddin

Plant Sci· November 2022

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Epitranscriptomics: An Additional Regulatory Layer in Plants' Development and Stress Response.
Yasira Shoaib, Babar Usman, Hunseung Kang, Ki-Hong Jung

Plants (Basel)· April 2022

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Computational and Transcriptomic Analysis Unraveled as a Putative Anthocyanin Transporter in Black Rice ( L.) Caryopsis.
Enerand Mackon, Yafei Ma, Guibeline Charlie Jeazet Dongho Epse Mackon, Babar Usman, Yitong Zhao

Genes (Basel)· April 2021

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Recent Insights into Anthocyanin Pigmentation, Synthesis, Trafficking, and Regulatory Mechanisms in Rice ( L.) Caryopsis.
Enerand Mackon, Guibeline Charlie Jeazet Dongho Epse Mackon, Yafei Ma, Muhammad Haneef Kashif, Niyaz Ali, Babar Usman

Biomolecules· March 2021

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CRISPR/Cas9 Guided Mutagenesis of Confers Increased Rice ( L.) Grain Length by Regulating Cysteine Proteinase Inhibitor and Ubiquitin-Related Proteins.
Babar Usman, Neng Zhao, Gul Nawaz, Baoxiang Qin, Fang Liu

Int J Mol Sci· March 2021

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Programmed Editing of Rice ( L.) Gene Using CRISPR/Cas9 Improves Grain Yield by Modulating the Expression of Pyruvate Enzymes and Cell Cycle Proteins.
Babar Usman, Gul Nawaz, Neng Zhao, Shanyue Liao, Baoxiang Qin

Int J Mol Sci· December 2020

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Precise Editing of the Gene by RNA-Guided Cas9 Nuclease Confers Enhanced Drought Tolerance and Grain Yield in Rice ( L.) by Regulating Circadian Rhythm and Abiotic Stress Responsive Proteins.
Babar Usman, Gul Nawaz, Neng Zhao, Shanyue Liao, Yaoguang Liu

Int J Mol Sci· October 2020

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Development of Chromosome Segment Substitution Lines (CSSLs) Derived from Guangxi Wild Rice ( Griff.) under Rice ( L.) Background and the Identification of QTLs for Plant Architecture, Agronomic Traits and Cold Tolerance.
Ruizhi Yuan, Neng Zhao, Babar Usman, Liang Luo, Shanyue Liao

Genes (Basel)· August 2020

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CRISPR/Cas9 Directed Mutagenesis of in High Yielding Basmati Rice ( L.) Line and Comparative Proteome Profiling of Unveiled Changes Triggered by Mutations.
Gul Nawaz, Babar Usman, Neng Zhao, Yue Han, Zhihua Li

Int J Mol Sci· August 2020

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Knockout of by CRISPR/Cas9 and iTRAQ-Based Proteomic Analysis of Mutants Revealed New Insights into Resistance in Elite Rice Line.
Gul Nawaz, Babar Usman, Haowen Peng, Neng Zhao, Ruizhi Yuan

Genes (Basel)· July 2020

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Generation of High Yielding and Fragrant Rice ( L.) Lines by CRISPR/Cas9 Targeted Mutagenesis of Three Homoeologs of Cytochrome P450 Gene Family and and Transcriptome and Proteome Profiling of Revealed Changes Triggered by Mutations.
Babar Usman, Gul Nawaz, Neng Zhao, Yaoguang Liu, Rongbai Li

Plants (Basel)· June 2020

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Transgenic crops for the agricultural improvement in Pakistan: a perspective of environmental stresses and the current status of genetically modified crops.
Usman Babar, Muhammad Amjad Nawaz, Usama Arshad, Muhammad Tehseen Azhar, Rana Muhammad Atif

GM Crops Food· February 2020

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Generation of semi-dwarf rice ( L.) lines by CRISPR/Cas9-directed mutagenesis of and proteomic analysis of unveiled changes caused by mutations.
Yue Han, Kaichong Teng, Gul Nawaz, Xuan Feng, Babar Usman

3 Biotech· November 2019

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Knockout of , a gene encoding proline-rich protein, confers enhanced cold sensitivity in rice ( L.) at the seedling stage.
Gul Nawaz, Yue Han, Babar Usman, Fang Liu, Baoxiang Qin

3 Biotech· July 2019

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