Publications by authors named "Bas Teusink"

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Gempipe: a tool for drafting, curating, and analyzing pan and multi-strain genome-scale metabolic models.
Gioele Lazzari, Giovanna E Felis, Elisa Salvetti, Matteo Calgaro, Francesca Di Cesare, Bas Teusink

mSystems· December 2025

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Resource allocation models: theory and applications in microbial biotechnology.
Bas Teusink, Pranas Grigaitis, Maaike Remeijer, Frank Bruggeman, Ralf Steuer

Curr Opin Biotechnol· November 2025

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The return of metabolism: biochemistry and physiology of glycolysis.
Nana-Maria Grüning, Federica Agostini, Camila Caldana, Johannes Hartl, Matthias Heinemann, Bas Teusink

Biol Rev Camb Philos Soc· November 2025

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MINN: A metabolic-informed neural network for integrating omics data into genome-scale metabolic modeling.
Gabriele Tazza, Francesco Moro, Dario Ruggeri, Bas Teusink, László Vidács

Comput Struct Biotechnol J· September 2025

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A modular model integrating metabolism, growth, and cell cycle predicts that fermentation is required to modulate cell size in yeast populations.
Marco Vanoni, Pasquale Palumbo, Federico Papa, Stefano Busti, Laura Gotti, Bas Teusink

PLoS Comput Biol· July 2025

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Making sense of gene expression control by flux sensing.
Bas Teusink, Robert Planqué, Frank J Bruggeman

Nat Metab· January 2025

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The unusual kinetics of lactate dehydrogenase of Schistosoma mansoni and their role in the rapid metabolic switch after penetration of the mammalian host.
Michiel L Bexkens, Olivier M F Martin, Jos M van den Heuvel, Marion G J Schmitz, Bas Teusink

Int J Parasitol· June 2024

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cAMP in budding yeast: Also a messenger for sucrose metabolism?
Dennis Botman, Sineka Kanagasabapathi, Mila I Rep, Kelly van Rossum, Evelina Tutucci, Bas Teusink

Biochim Biophys Acta Mol Cell Res· April 2024

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Understanding and computational design of genetic circuits of metabolic networks.
Alicia Berkvens, Luis Salinas, Maaike Remeijer, Robert Planqué, Bas Teusink

Essays Biochem· April 2024

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A fast method to distinguish between fermentative and respiratory metabolisms in single yeast cells.
Laura Luzia, Julius Battjes, Emile Zwering, Derek Jansen, Chrats Melkonian, Bas Teusink

iScience· January 2024

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The hierarchy of sugar catabolization in .
Sieze Douwenga, Berdien van Olst, Sjef Boeren, Yanzhang Luo, Xin Lai, Bas Teusink

Microbiol Spectr· December 2023

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Trade-offs between the instantaneous growth rate and long-term fitness: Consequences for microbial physiology and predictive computational models.
Frank J Bruggeman, Bas Teusink, Ralf Steuer

Bioessays· October 2023

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Whole-cell metabolic control analysis.
Frank J Bruggeman, Maaike Remeijer, Maarten Droste, Luis Salinas, Meike Wortel, Bas Teusink

Biosystems· October 2023

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The pH-dependent lactose metabolism of Lactobacillus delbrueckii subsp. bulgaricus: An integrative view through a mechanistic computational model.
Tamara Bendig, Andreas Ulmer, Laura Luzia, Susanne Müller, Sven Sahle, Bas Teusink

J Biotechnol· September 2023

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Elucidating yeast glycolytic dynamics at steady state growth and glucose pulses through kinetic metabolic modeling.
David Lao-Martil, Joep P J Schmitz, Bas Teusink, Natal A W van Riel

Metab Eng· May 2023

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Ethanol-lactate transition of Lachancea thermotolerans is linked to nitrogen metabolism.
Julius Battjes, Chrats Melkonian, Sebastián N Mendoza, Auke Haver, Kosai Al-Nakeeb, Bas Teusink

Food Microbiol· April 2023

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Elevated energy costs of biomass production in mitochondrial respiration-deficient Saccharomyces cerevisia.
Pranas Grigaitis, Samira L van den Bogaard, Bas Teusink

FEMS Yeast Res· January 2023

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Using the AKAR3-EV biosensor to assess Sch9p- and PKA-signalling in budding yeast.
Dennis Botman, Sineka Kanagasabapathi, Philipp Savakis, Bas Teusink

FEMS Yeast Res· January 2023

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An excess of glycolytic enzymes under glucose-limited conditions may enable Saccharomyces cerevisiae to adapt to nutrient availability.
Pranas Grigaitis, Bas Teusink

FEBS Lett· December 2022

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pH dependencies of glycolytic enzymes of yeast under in vivo-like assay conditions.
Laura Luzia, David Lao-Martil, Philipp Savakis, Johan van Heerden, Natal van Riel, Bas Teusink

FEBS J· October 2022

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A Computational Toolbox to Investigate the Metabolic Potential and Resource Allocation in Fission Yeast.
Pranas Grigaitis, Douwe A J Grundel, Eunice van Pelt-KleinJan, Mirushe Isaku, Guixiang Xie, Bas Teusink

mSystems· August 2022

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Metabolic Modeling of Wine Fermentation at Genome Scale.
Sebastián N Mendoza, Pedro A Saa, Bas Teusink, Eduardo Agosin

Methods Mol Biol· May 2022

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Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies.
Ibrahim E Elsemman, Angelica Rodriguez Prado, Pranas Grigaitis, Manuel Garcia Albornoz, Victoria Harman, Bas Teusink

Nat Commun· February 2022

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Selection for Cell Yield Does Not Reduce Overflow Metabolism in Escherichia coli.
Iraes Rabbers, Willi Gottstein, Adam M Feist, Bas Teusink, Frank J Bruggeman

Mol Biol Evol· January 2022

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Kinetic Modeling of Central Carbon Metabolism: Achievements, Limitations, and Opportunities.
David Lao-Martil, Koen J A Verhagen, Joep P J Schmitz, Bas Teusink, S Aljoscha Wahl

Metabolites· January 2022

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