Publications by authors named "Beatrice Alex"

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Infusing clinical knowledge into language models by subword optimisation and embedding initialisation.
Abul Hasan, Jinge Wu, Quang Ngoc Nguyen, Salomé Andres, Imane Guellil, Beatrice Alex

Comput Biol Med· September 2025

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Automated neuroradiological support systems for multiple cerebrovascular disease markers - A systematic review and meta-analysis.
Jesse Phitidis, Alison Q O'Neil, William N Whiteley, Beatrice Alex, Joanna M Wardlaw

Comput Methods Programs Biomed· June 2025

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Care home resident identification: A comparison of address matching methods with Natural Language Processing.
Víctor Suárez-Paniagua, Arlene Casey, Charis A Marwick, Jennifer K Burton, Helen Callaby, Beatrice Alex

PLoS One· December 2024

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Natural language processing for detecting adverse drug events: A systematic review protocol.
Imane Guellil, Jinge Wu, Aryo Pradipta Gema, Farah Francis, Yousra Berrachedi, Beatrice Alex

NIHR Open Res· December 2024

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Can GPT-3.5 generate and code discharge summaries?
Matúš Falis, Aryo Pradipta Gema, Hang Dong, Luke Daines, Siddharth Basetti, Alexandra Birch, Beatrice Alex

J Am Med Inform Assoc· October 2024

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: a framework for linking free-text addresses to the Ordnance Survey Unique Property Reference Number database.
Huayu Zhang, Arlene Casey, Imane Guellil, Víctor Suárez-Paniagua, Clare MacRae, Beatrice Alex

Front Digit Health· November 2023

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Understanding the performance and reliability of NLP tools: a comparison of four NLP tools predicting stroke phenotypes in radiology reports.
Arlene Casey, Emma Davidson, Claire Grover, Richard Tobin, Andreas Grivas, Beatrice Alex

Front Digit Health· September 2023

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Ontology-driven and weakly supervised rare disease identification from clinical notes.
Hang Dong, Víctor Suárez-Paniagua, Huayu Zhang, Minhong Wang, Arlene Casey, Beatrice Alex

BMC Med Inform Decis Mak· May 2023

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A survey on clinical natural language processing in the United Kingdom from 2007 to 2022.
Honghan Wu, Minhong Wang, Jinge Wu, Farah Francis, Yun-Hsuan Chang, Alex Shavick, Alex Handy, Beatrice Alex

NPJ Digit Med· December 2022

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Automated clinical coding: what, why, and where we are?
Hang Dong, Matúš Falis, William Whiteley, Beatrice Alex, Joshua Matterson

NPJ Digit Med· October 2022

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Edinburgh_UCL_Health@SMM4H'22: From Glove to Flair for handling imbalanced healthcare corpora related to Adverse Drug Events, Change in medication and self-reporting vaccination.
Imane Guellil, Jinge Wu, Honghan Wu, Tony Sun, Beatrice Alex

Proc Int Conf Comput Ling· October 2022

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The reporting quality of natural language processing studies: systematic review of studies of radiology reports.
Emma M Davidson, Michael T C Poon, Arlene Casey, Andreas Grivas, Daniel Duma, Beatrice Alex

BMC Med Imaging· October 2021

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Classifying patient and professional voice in social media health posts.
Beatrice Alex, Donald Whyte, Daniel Duma, Roma English Owen, Elizabeth A L Fairley

BMC Med Inform Decis Mak· August 2021

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A systematic review of natural language processing applied to radiology reports.
Arlene Casey, Emma Davidson, Michael Poon, Hang Dong, Daniel Duma, Beatrice Alex

BMC Med Inform Decis Mak· June 2021

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Text mining brain imaging reports.
Beatrice Alex, Claire Grover, Richard Tobin, Cathie Sudlow, Grant Mair

J Biomed Semantics· November 2019

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A validated natural language processing algorithm for brain imaging phenotypes from radiology reports in UK electronic health records.
Emily Wheater, Grant Mair, Cathie Sudlow, Beatrice Alex, Claire Grover

BMC Med Inform Decis Mak· September 2019

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Automating curation using a natural language processing pipeline.
Beatrice Alex, Claire Grover, Barry Haddow, Mijail Kabadjov, Ewan Klein

Genome Biol· December 2008

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Assisted curation: does text mining really help?
Beatrice Alex, Claire Grover, Barry Haddow, Mijail Kabadjov, Ewan Klein

Pac Symp Biocomput· March 2008

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Exploring the boundaries: gene and protein identification in biomedical text.
Jenny Finkel, Shipra Dingare, Christopher D Manning, Malvina Nissim, Beatrice Alex

BMC Bioinformatics· February 2006

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