Publications by authors named "Benjamin Zoller"

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A conserved coupling of transcriptional ON and OFF periods underlies bursting dynamics.
Po-Ta Chen, Michal Levo, Benjamin Zoller, Thomas Gregor

Nat Struct Mol Biol· October 2025

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Invariant non-equilibrium dynamics of transcriptional regulation optimize information flow.
Benjamin Zoller, Alexis Bénichou, Thomas Gregor, Gašper Tkačik

ArXiv· July 2025

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Gene activity fully predicts transcriptional bursting dynamics.
Po-Ta Chen, Michal Levo, Benjamin Zoller, Thomas Gregor

ArXiv· June 2024

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Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome.
David B Brückner, Hongtao Chen, Lev Barinov, Benjamin Zoller, Thomas Gregor

Science· June 2023

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Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome.
David B Brückner, Hongtao Chen, Lev Barinov, Benjamin Zoller, Thomas Gregor

bioRxiv· February 2023

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Eukaryotic gene regulation at equilibrium, or non?
Benjamin Zoller, Thomas Gregor, Gašper Tkačik

Curr Opin Syst Biol· September 2022

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Nonequilibrium models of optimal enhancer function.
Rok Grah, Benjamin Zoller, Gašper Tkačik

Proc Natl Acad Sci U S A· December 2020

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Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting.
Benjamin Zoller, Shawn C Little, Thomas Gregor

Cell· October 2018

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Modulation of transcriptional burst frequency by histone acetylation.
Damien Nicolas, Benjamin Zoller, David M Suter, Felix Naef

Proc Natl Acad Sci U S A· July 2018

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CAST: An automated segmentation and tracking tool for the analysis of transcriptional kinetics from single-cell time-lapse recordings.
Simon Blanchoud, Damien Nicolas, Benjamin Zoller, Onur Tidin, Félix Naef

Methods· September 2015

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Structure of silent transcription intervals and noise characteristics of mammalian genes.
Benjamin Zoller, Damien Nicolas, Nacho Molina, Felix Naef

Mol Syst Biol· July 2015

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Stimulus-induced modulation of transcriptional bursting in a single mammalian gene.
Nacho Molina, David M Suter, Rosamaria Cannavo, Benjamin Zoller, Ivana Gotic

Proc Natl Acad Sci U S A· December 2013

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Absolute quantification of transcription factors during cellular differentiation using multiplexed targeted proteomics.
Jovan Simicevic, Adrien W Schmid, Paola A Gilardoni, Benjamin Zoller, Sunil K Raghav

Nat Methods· June 2013

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