Publications by authors named "Bob Carpenter"

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Incorporating local step-size adaptivity into the no-U-turn sampler using Gibbs self-tuning.
Nawaf Bou-Rabee, Bob Carpenter, Tore Selland Kleppe, Milo Marsden

J Chem Phys· August 2025

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Bayesian spatial modelling of localised SARS-CoV-2 transmission through mobility networks across England.
Thomas Ward, Mitzi Morris, Andrew Gelman, Bob Carpenter, William Ferguson

PLoS Comput Biol· November 2023

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Multi-level analysis of the gut-brain axis shows autism spectrum disorder-associated molecular and microbial profiles.
James T Morton, Dong-Min Jin, Robert H Mills, Yan Shao, Gibraan Rahman, Bob Carpenter

Nat Neurosci· July 2023

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Ensemble Reweighting Using Cryo-EM Particle Images.
Wai Shing Tang, David Silva-Sánchez, Julian Giraldo-Barreto, Bob Carpenter, Sonya M Hanson

J Phys Chem B· June 2023

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Replacement dynamics and the pathogenesis of the Alpha, Delta and Omicron variants of SARS-CoV-2.
Thomas Ward, Alex Glaser, Christopher E Overton, Bob Carpenter, Nick Gent

Epidemiol Infect· December 2022

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A Bayesian approach to extracting free-energy profiles from cryo-electron microscopy experiments.
Julian Giraldo-Barreto, Sebastian Ortiz, Erik H Thiede, Karen Palacio-Rodriguez, Bob Carpenter

Sci Rep· July 2021

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Bayesian Analysis of Tests with Unknown Specificity and Sensitivity.
Andrew Gelman, Bob Carpenter

J R Stat Soc Ser C Appl Stat· November 2020

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Stan: A Probabilistic Programming Language.
Bob Carpenter, Andrew Gelman, Matthew D Hoffman, Daniel Lee, Ben Goodrich

J Stat Softw· January 2017

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Overview of BioCreative II gene mention recognition.
Larry Smith, Lorraine K Tanabe, Rie Johnson nee Ando, Cheng-Ju Kuo, I-Fang Chung, Bob Carpenter

Genome Biol· December 2008

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