Publications by authors named "Brian D Slaughter"

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Molecular and cellular characterization of planarian stem cell microenvironments.
Frederick G Mann, Carolyn E Brewster, Dung M Vuu, Mol Mir, Riley Galton, Brian D Slaughter

Cell Rep· October 2025

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An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.
Xingyu Liu, Ying Zhang, Zhihui Wen, Yan Hao, Charles A S Banks, Brian D Slaughter

Proc Natl Acad Sci U S A· August 2024

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Lola-I is a promoter pioneer factor that establishes de novo Pol II pausing during development.
Vivekanandan Ramalingam, Xinyang Yu, Brian D Slaughter, Jay R Unruh, Kaelan J Brennan

Nat Commun· September 2023

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Shared retinoic acid responsive enhancers coordinately regulate nascent transcription of Hoxb coding and non-coding RNAs in the developing mouse neural tube.
Zainab Afzal, Jeffrey J Lange, Christof Nolte, Sean McKinney, Christopher Wood, Brian D Slaughter

Development· May 2023

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Serial Capture Affinity Purification and Integrated Structural Modeling of the H3K4me3 Binding and DNA Damage Related WDR76:SPIN1 Complex.
Xingyu Liu, Ying Zhang, Zhihui Wen, Yan Hao, Charles A S Banks, Brian D Slaughter

bioRxiv· February 2023

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A role for the Cockayne Syndrome B (CSB)-Elongin ubiquitin ligase complex in signal-dependent RNA polymerase II transcription.
Juston C Weems, Brian D Slaughter, Jay R Unruh, Kyle J Weaver, Brandon D Miller

J Biol Chem· July 2021

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Repeated evolution of circadian clock dysregulation in cavefish populations.
Katya L Mack, James B Jaggard, Jenna L Persons, Emma Y Roback, Courtney N Passow, Brian D Slaughter

PLoS Genet· July 2021

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Driving integrative structural modeling with serial capture affinity purification.
Xingyu Liu, Ying Zhang, Zhihui Wen, Yan Hao, Charles A S Banks, Brian D Slaughter

Proc Natl Acad Sci U S A· December 2020

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Adaptation to low parasite abundance affects immune investment and immunopathological responses of cavefish.
Robert Peuß, Andrew C Box, Shiyuan Chen, Yongfu Wang, Dai Tsuchiya, Brian D Slaughter

Nat Ecol Evol· October 2020

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Super-resolution Microscopy-based Bimolecular Fluorescence Complementation to Study Protein Complex Assembly and Co-localization.
Jingjing Chen, Zulin Yu, Jay R Unruh, Brian D Slaughter, Sue L Jaspersen

Bio Protoc· February 2020

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The stoichiometry of the outer kinetochore is modulated by microtubule-proximal regulatory factors.
Karthik Dhatchinamoorthy, Jay R Unruh, Jeffrey J Lange, Michaella Levy, Brian D Slaughter

J Cell Biol· July 2019

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Yeast centrosome components form a noncanonical LINC complex at the nuclear envelope insertion site.
Jingjing Chen, Jennifer M Gardner, Zulin Yu, Sarah E Smith, Sean McKinney, Brian D Slaughter

J Cell Biol· May 2019

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Functional Analysis of the Yeast LINC Complex Using Fluctuation Spectroscopy and Super-Resolution Imaging.
Jay R Unruh, Brian D Slaughter, Sue L Jaspersen

Methods Mol Biol· April 2019

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Imaging-based assays for investigating functions of the RNA polymerase II elongation factor Elongin and the Elongin ubiquitin ligase.
Juston C Weems, Jay R Unruh, Brian D Slaughter, Ronald C Conaway, Joan W Conaway

Methods· April 2019

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Combined expansion microscopy with structured illumination microscopy for analyzing protein complexes.
Yongfu Wang, Zulin Yu, Cori K Cahoon, Tari Parmely, Nancy Thomas, Brian D Slaughter

Nat Protoc· August 2018

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The anatomy of a nucleus: As revealed by chromosome painting.
Brian D Slaughter, R Scott Hawley

PLoS Genet· July 2018

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Integrative structure and functional anatomy of a nuclear pore complex.
Seung Joong Kim, Javier Fernandez-Martinez, Ilona Nudelman, Yi Shi, Wenzhu Zhang, Brian D Slaughter

Nature· March 2018

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Structural plasticity of the living kinetochore.
Karthik Dhatchinamoorthy, Manjunatha Shivaraju, Jeffrey J Lange, Boris Rubinstein, Jay R Unruh, Brian D Slaughter

J Cell Biol· November 2017

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HOXA1 and TALE proteins display cross-regulatory interactions and form a combinatorial binding code on HOXA1 targets.
Bony De Kumar, Hugo J Parker, Ariel Paulson, Mark E Parrish, Irina Pushel, Brian D Slaughter

Genome Res· September 2017

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Superresolution expansion microscopy reveals the three-dimensional organization of the synaptonemal complex.
Cori K Cahoon, Zulin Yu, Yongfu Wang, Fengli Guo, Jay R Unruh, Brian D Slaughter

Proc Natl Acad Sci U S A· August 2017

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Dynamic regulation of Nanog and stem cell-signaling pathways by Hoxa1 during early neuro-ectodermal differentiation of ES cells.
Bony De Kumar, Hugo J Parker, Mark E Parrish, Jeffrey J Lange, Brian D Slaughter

Proc Natl Acad Sci U S A· June 2017

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Condensin II is anchored by TFIIIC and H3K4me3 in the mammalian genome and supports the expression of active dense gene clusters.
Kobe C Yuen, Brian D Slaughter, Jennifer L Gerton

Sci Adv· June 2017

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Cockayne syndrome B protein regulates recruitment of the Elongin A ubiquitin ligase to sites of DNA damage.
Juston C Weems, Brian D Slaughter, Jay R Unruh, Stefan Boeing, Shawn M Hall

J Biol Chem· April 2017

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A Putative Biochemical Engram of Long-Term Memory.
Liying Li, Consuelo Perez Sanchez, Brian D Slaughter, Yubai Zhao, Mohammed Repon Khan

Curr Biol· December 2016

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Analysis of membrane proteins localizing to the inner nuclear envelope in living cells.
Christine J Smoyer, Santharam S Katta, Jennifer M Gardner, Lynn Stoltz, Scott McCroskey, Brian D Slaughter

J Cell Biol· November 2016

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