Publications by authors named "Brian M Bot"

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Disentangling personalized treatment effects from "time-of-the-day" confounding in mobile health studies.
Elias Chaibub Neto, Thanneer M Perumal, Abhishek Pratap, Aryton Tediarjo, Brian M Bot

PLoS One· August 2022

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Remote smartphone monitoring of Parkinson's disease and individual response to therapy.
Larsson Omberg, Elias Chaibub Neto, Thanneer M Perumal, Abhishek Pratap, Aryton Tediarjo, Brian M Bot

Nat Biotechnol· April 2022

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Assessment of the research program's informed consent process.
Megan Doerr, Sarah Moore, Vanessa Barone, Scott Sutherland, Brian M Bot

AJOB Empir Bioeth· October 2021

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Detecting the impact of subject characteristics on machine learning-based diagnostic applications.
Elias Chaibub Neto, Abhishek Pratap, Thanneer M Perumal, Meghasyam Tummalacherla, Phil Snyder, Brian M Bot

NPJ Digit Med· October 2019

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Physical activity, sleep and cardiovascular health data for 50,000 individuals from the MyHeart Counts Study.
Steven G Hershman, Brian M Bot, Anna Shcherbina, Megan Doerr, Yasbanoo Moayedi

Sci Data· April 2019

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The Healthy Pregnancy Research Program: transforming pregnancy research through a ResearchKit app.
Jennifer M Radin, Steven R Steinhubl, Andrew I Su, Hansa Bhargava, Benjamin Greenberg, Brian M Bot

NPJ Digit Med· September 2018

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The asthma mobile health study, smartphone data collected using ResearchKit.
Yu-Feng Yvonne Chan, Brian M Bot, Micol Zweig, Nicole Tignor, Weiping Ma

Sci Data· May 2018

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The Mole Mapper Study, mobile phone skin imaging and melanoma risk data collected using ResearchKit.
Dan E Webster, Christine Suver, Megan Doerr, Erin Mounts, Lisa Domenico, Brian M Bot

Sci Data· February 2017

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Formative Evaluation of Participant Experience With Mobile eConsent in the App-Mediated Parkinson mPower Study: A Mixed Methods Study.
Megan Doerr, Amy Maguire Truong, Brian M Bot, John Wilbanks, Christine Suver

JMIR Mhealth Uhealth· February 2017

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Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data.
Justin Guinney, Tao Wang, Teemu D Laajala, Kimberly Kanigel Winner, J Christopher Bare, Brian M Bot

Lancet Oncol· January 2017

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PERSONALIZED HYPOTHESIS TESTS FOR DETECTING MEDICATION RESPONSE IN PARKINSON DISEASE PATIENTS USING iPHONE SENSOR DATA.
Elias Chaibub Neto, Brian M Bot, Thanneer Perumal, Larsson Omberg, Justin Guinney

Pac Symp Biocomput· October 2016

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Mobile health: the power of wearables, sensors, and apps to transform clinical trials.
Bernard Munos, Pamela C Baker, Brian M Bot, Michelle Crouthamel, Glen de Vries

Ann N Y Acad Sci· July 2016

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DREAMTools: a Python package for scoring collaborative challenges.
Thomas Cokelaer, Mukesh Bansal, Christopher Bare, Erhan Bilal, Brian M Bot

F1000Res· May 2016

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The mPower study, Parkinson disease mobile data collected using ResearchKit.
Brian M Bot, Christine Suver, Elias Chaibub Neto, Michael Kellen, Arno Klein

Sci Data· March 2016

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A large dataset of protein dynamics in the mammalian heart proteome.
Edward Lau, Quan Cao, Dominic C M Ng, Brian J Bleakley, T Umut Dincer, Brian M Bot

Sci Data· March 2016

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The consensus molecular subtypes of colorectal cancer.
Justin Guinney, Rodrigo Dienstmann, Xin Wang, Aurélien de Reyniès, Andreas Schlicker, Brian M Bot

Nat Med· November 2015

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Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models.
Jonathan R Karr, Alex H Williams, Jeremy D Zucker, Andreas Raue, Bernhard Steiert, Brian M Bot

PLoS Comput Biol· May 2015

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Molecular markers identify subtypes of stage III colon cancer associated with patient outcomes.
Frank A Sinicrope, Qian Shi, Thomas C Smyrk, Stephen N Thibodeau, Rodrigo Dienstmann, Brian M Bot

Gastroenterology· January 2015

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Somatic expression of ENRAGE is associated with obesity status among patients with clear cell renal cell carcinoma.
Jeanette E Eckel-Passow, Daniel J Serie, Brian M Bot, Richard W Joseph, Steven N Hart

Carcinogenesis· April 2014

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Genome-wide characterization of transcriptional patterns in high and low antibody responders to rubella vaccination.
Iana H Haralambieva, Ann L Oberg, Inna G Ovsyannikova, Richard B Kennedy, Diane E Grill, Brian M Bot

PLoS One· February 2014

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ANKS1B is a smoking-related molecular alteration in clear cell renal cell carcinoma.
Jeanette E Eckel-Passow, Daniel J Serie, Brian M Bot, Richard W Joseph, John C Cheville

BMC Urol· January 2014

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clearScience: Infrastructure for Communicating Data-Intensive Science.
Brian M Bot, David Burdick, Michael Kellen, Erich S Huang

AMIA Jt Summits Transl Sci Proc· December 2013

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Comparison of outcomes after fluorouracil-based adjuvant therapy for stages II and III colon cancer between 1978 to 1995 and 1996 to 2007: evidence of stage migration from the ACCENT database.
Qian Shi, Thierry Andre, Axel Grothey, Greg Yothers, Stanley R Hamilton, Brian M Bot

J Clin Oncol· October 2013

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Impact of bioinformatic procedures in the development and translation of high-throughput molecular classifiers in oncology.
Charles Ferté, Andrew D Trister, Erich Huang, Brian M Bot, Justin Guinney

Clin Cancer Res· August 2013

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Technical and biological variance structure in mRNA-Seq data: life in the real world.
Ann L Oberg, Brian M Bot, Diane E Grill, Gregory A Poland, Terry M Therneau

BMC Genomics· July 2012

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