Publications by authors named "Bruce Randall Donald"

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HASH: a program to accurately predict protein Hα shifts from neighboring backbone shifts.
Jianyang Zeng, Pei Zhou, Bruce Randall Donald

J Biomol NMR· January 2013

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Protein loop closure using orientational restraints from NMR data.
Chittaranjan Tripathy, Jianyang Zeng, Pei Zhou, Bruce Randall Donald

Proteins· February 2012

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A Bayesian approach for determining protein side-chain rotamer conformations using unassigned NOE data.
Jianyang Zeng, Kyle E Roberts, Pei Zhou, Bruce Randall Donald

J Comput Biol· November 2011

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Protein side-chain resonance assignment and NOE assignment using RDC-defined backbones without TOCSY data.
Jianyang Zeng, Pei Zhou, Bruce Randall Donald

J Biomol NMR· August 2011

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High-resolution protein structure determination starting with a global fold calculated from exact solutions to the RDC equations.
Jianyang Zeng, Jeffrey Boyles, Chittaranjan Tripathy, Lincong Wang, Anthony Yan, Bruce Randall Donald

J Biomol NMR· November 2009

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Structure-based protein NMR assignments using native structural ensembles.
Mehmet Serkan Apaydin, Vincent Conitzer, Bruce Randall Donald

J Biomol NMR· April 2008

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A data-driven, systematic search algorithm for structure determination of denatured or disordered proteins.
Lincong Wang, Bruce Randall Donald

Comput Syst Bioinformatics Conf· June 2007

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An efficient and accurate algorithm for assigning nuclear overhauser effect restraints using a rotamer library ensemble and residual dipolar couplings.
Lincong Wang, Bruce Randall Donald

Proc IEEE Comput Syst Bioinform Conf· May 2007

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An algebraic geometry approach to protein structure determination from NMR data.
Lincong Wang, Ramgopal R Mettu, Bruce Randall Donald

Proc IEEE Comput Syst Bioinform Conf· May 2007

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A polynomial-time algorithm for de novo protein backbone structure determination from nuclear magnetic resonance data.
Lincong Wang, Ramgopal R Mettu, Bruce Randall Donald

J Comput Biol· September 2006

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3D structural homology detection via unassigned residual dipolar couplings.
Christopher James Langmead, Bruce Randall Donald

Proc IEEE Comput Soc Bioinform Conf· August 2006

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High-throughput 3D structural homology detection via NMR resonance assignment.
Christopher James Langmead, Bruce Randall Donald

Proc IEEE Comput Syst Bioinform Conf· July 2006

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Analysis of a systematic search-based algorithm for determining protein backbone structure from a minimum number of residual dipolar couplings.
Lincong Wang, Bruce Randall Donald

Proc IEEE Comput Syst Bioinform Conf· July 2006

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High-throughput inference of protein-protein interfaces from unassigned NMR data.
Ramgopal R Mettu, Ryan H Lilien, Bruce Randall Donald

Bioinformatics· June 2005

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A maximum entropy algorithm for rhythmic analysis of genome-wide expression patterns.
Christopher James Langmead, C Robertson McClung, Bruce Randall Donald

Proc IEEE Comput Soc Bioinform Conf· May 2005

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A polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments.
Christopher James Langmead, Anthony Yan, Ryan Lilien, Lincong Wang, Bruce Randall Donald

J Comput Biol· August 2004

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Exact solutions for internuclear vectors and backbone dihedral angles from NH residual dipolar couplings in two media, and their application in a systematic search algorithm for determining protein backbone structure.
Lincong Wang, Bruce Randall Donald

J Biomol NMR· July 2004

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An expectation/maximization nuclear vector replacement algorithm for automated NMR resonance assignments.
Christopher James Langmead, Bruce Randall Donald

J Biomol NMR· June 2004

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Phase-independent rhythmic analysis of genome-wide expression patterns.
Christopher James Langmead, Anthony K Yan, C Robertson McClung, Bruce Randall Donald

J Comput Biol· March 2004

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