Publications by authors named "Carin K Vanderpool"

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Small RNAs positively and negatively control transcription elongation through modulation of Rho utilization site accessibility.
Kristen R Farley, Andrew K Buechler, Colleen M Bianco, Carin K Vanderpool

mBio· December 2025

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Plasmid transmission dynamics and evolution of partner quality in a natural population of .
David Vereau Gorbitz, Chase P Schwarz, John G McMullen, Mario Cerón-Romero, Rebecca T Doyle, Carin K Vanderpool

mBio· December 2025

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The pathogenicity island 1-encoded small RNA InvR mediates post-transcriptional feedback control of the activator HilA in .
Yutong Hou, Kyungsub Kim, Fatih Cakar, Yekaterina A Golubeva, James M Slauch, Carin K Vanderpool

J Bacteriol· March 2025

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The pathogenicity island 1-encoded small RNA InvR mediates post-transcriptional feedback control of the activator HilA in .
Yutong Hou, Kyungsub Kim, Fatih Cakar, Yekaterina A Golubeva, James M Slauch, Carin K Vanderpool

bioRxiv· November 2024

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Determinants of raffinose family oligosaccharide use in species.
Anubhav Basu, Amanda N D Adams, Patrick H Degnan, Carin K Vanderpool

J Bacteriol· October 2024

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Transcriptional and post-transcriptional mechanisms modulate cyclopropane fatty acid synthase through small RNAs in .
Colleen M Bianco, Nancy N Caballero-Rothar, Xiangqian Ma, Kristen R Farley, Carin K Vanderpool

J Bacteriol· August 2024

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Determinants of raffinose family oligosaccharide use in species.
Anubhav Basu, Amanda N D Adams, Patrick H Degnan, Carin K Vanderpool

bioRxiv· June 2024

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Mechanisms of Regulation of Cryptic Prophage-Encoded Gene Products in Escherichia coli.
Preethi T Ragunathan, Evelyne Ng Kwan Lim, Xiangqian Ma, Eric Massé, Carin K Vanderpool

J Bacteriol· August 2023

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Small RNAs Activate Salmonella Pathogenicity Island 1 by Modulating mRNA Stability through the mRNA 3' Untranslated Region.
Sabrina Z Abdulla, Kyungsub Kim, Muhammad S Azam, Yekaterina A Golubeva, Fatih Cakar, Carin K Vanderpool

J Bacteriol· January 2023

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The Small RNA MicC Downregulates Translation To Control the Salmonella Pathogenicity Island 1 Type III Secretion System in Salmonella enterica Serovar Typhimurium.
Fatih Cakar, Yekaterina A Golubeva, Carin K Vanderpool, James M Slauch

J Bacteriol· January 2022

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A Novel Family of RNA-Binding Proteins Regulate Polysaccharide Metabolism in .
Amanda N D Adams, Muhammad S Azam, Zachary A Costliow, Xiangqian Ma, Patrick H Degnan, Carin K Vanderpool

J Bacteriol· October 2021

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Kinetic modeling reveals additional regulation at co-transcriptional level by post-transcriptional sRNA regulators.
Matthew A Reyer, Shriram Chennakesavalu, Emily M Heideman, Xiangqian Ma, Magda Bujnowska, Carin K Vanderpool

Cell Rep· September 2021

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Binding of the RNA Chaperone Hfq on Target mRNAs Promotes the Small RNA RyhB-Induced Degradation in .
David Lalaouna, Karine Prévost, Seongjin Park, Thierry Chénard, Marie-Pier Bouchard, Carin K Vanderpool

Noncoding RNA· September 2021

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Effects of individual base-pairs on in vivo target search and destruction kinetics of bacterial small RNA.
Anustup Poddar, Muhammad S Azam, Tunc Kayikcioglu, Maksym Bobrovskyy, Jichuan Zhang, Carin K Vanderpool

Nat Commun· February 2021

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Stochastic Analysis Demonstrates the Dual Role of Hfq in Chaperoning Sugar Shock Response.
David M Bianchi, Troy A Brier, Anustup Poddar, Muhammad S Azam, Carin K Vanderpool

Front Mol Biosci· December 2020

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Translation inhibition from a distance: The small RNA SgrS silences a ribosomal protein S1-dependent enhancer.
Muhammad S Azam, Carin K Vanderpool

Mol Microbiol· September 2020

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Cryptic-Prophage-Encoded Small Protein DicB Protects from Phage Infection by Inhibiting Inner Membrane Receptor Proteins.
Preethi T Ragunathan, Carin K Vanderpool

J Bacteriol· December 2019

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The Small RNA PinT Contributes to PhoP-Mediated Regulation of the Pathogenicity Island 1 Type III Secretion System in Salmonella enterica Serovar Typhimurium.
Kyungsub Kim, Alexander D Palmer, Carin K Vanderpool, James M Slauch

J Bacteriol· October 2019

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Bacterial Cyclopropane Fatty Acid Synthase mRNA Is Targeted by Activating and Repressing Small RNAs.
Colleen M Bianco, Kathrin S Fröhlich, Carin K Vanderpool

J Bacteriol· October 2019

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Determinants of target prioritization and regulatory hierarchy for the bacterial small RNA SgrS.
Maksym Bobrovskyy, Muhammad S Azam, Jane K Frandsen, Jichuan Zhang, Anustup Poddar, Carin K Vanderpool

Mol Microbiol· October 2019

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Oxygen-dependent regulation of SPI1 type three secretion system by small RNAs in Salmonella enterica serovar Typhimurium.
Kyungsub Kim, Yekaterina A Golubeva, Carin K Vanderpool, James M Slauch

Mol Microbiol· March 2019

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sRNA Target Prediction Organizing Tool (SPOT) Integrates Computational and Experimental Data To Facilitate Functional Characterization of Bacterial Small RNAs.
Alisa M King, Carin K Vanderpool, Patrick H Degnan

mSphere· January 2019

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Dual-Function RNAs.
Medha Raina, Alisa King, Colleen Bianco, Carin K Vanderpool

Microbiol Spectr· September 2018

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Translational regulation by bacterial small RNAs via an unusual Hfq-dependent mechanism.
Muhammad S Azam, Carin K Vanderpool

Nucleic Acids Res· March 2018

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The Small Protein SgrT Controls Transport Activity of the Glucose-Specific Phosphotransferase System.
Chelsea R Lloyd, Seongjin Park, Jingyi Fei, Carin K Vanderpool

J Bacteriol· June 2017

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