Publications by authors named "Carl F Schaefer"

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Genome-wide transcriptional sequencing identifies novel mutations in metabolic genes in human hepatocellular carcinoma.
Daoud M Meerzaman, Chunhua Yan, Qing-Rong Chen, Michael N Edmonson, Carl F Schaefer

Cancer Genomics Proteomics· December 2014

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Systems analysis utilising pathway interactions identifies sonic hedgehog pathway as a primary biomarker and oncogenic target in hepatocellular carcinoma.
Sol Efroni, Daoud Meerzaman, Carl F Schaefer, Sharon Greenblum, Myung Soo-Lyu

IET Syst Biol· December 2013

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The PathOlogist: an automated tool for pathway-centric analysis.
Sharon I Greenblum, Sol Efroni, Carl F Schaefer, Ken H Buetow

BMC Bioinformatics· May 2011

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Detecting cancer gene networks characterized by recurrent genomic alterations in a population.
Sol Efroni, Rotem Ben-Hamo, Michael Edmonson, Sharon Greenblum, Carl F Schaefer

PLoS One· January 2011

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The completion of the Mammalian Gene Collection (MGC).

Genome Res· December 2009

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Identification of microbial DNA in human cancer.
Christopher G Duncan, Rebecca J Leary, Jimmy Cheng-Ho Lin, Jordan Cummins, Chunhui Di, Carl F Schaefer

BMC Med Genomics· May 2009

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PID: the Pathway Interaction Database.
Carl F Schaefer, Kira Anthony, Shiva Krupa, Jeffrey Buchoff, Matthew Day

Nucleic Acids Res· January 2009

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Identification of key processes underlying cancer phenotypes using biologic pathway analysis.
Sol Efroni, Carl F Schaefer, Kenneth H Buetow

PLoS One· May 2007

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Cancers as wounds that do not heal: differences and similarities between renal regeneration/repair and renal cell carcinoma.
Joseph Riss, Chand Khanna, Seongjoon Koo, Gadisetti V R Chandramouli, Howard H Yang, Carl F Schaefer

Cancer Res· July 2006

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A proteomic characterization of the plasma membrane of human epidermis by high-throughput mass spectrometry.
Josip Blonder, Atsushi Terunuma, Thomas P Conrads, King C Chan, Carole Yee, Carl F Schaefer

J Invest Dermatol· October 2004

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The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Daniela S Gerhard, Lukas Wagner, Elise A Feingold, Carolyn M Shenmen, Lynette H Grouse, Carl F Schaefer

Genome Res· October 2004

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Proteomic analysis of detergent-resistant membrane rafts.
Josip Blonder, Martha L Hale, David A Lucas, Carl F Schaefer, Li-Rong Yu

Electrophoresis· May 2004

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Quantitative proteomic analysis of inorganic phosphate-induced murine MC3T3-E1 osteoblast cells.
Kelly A Conrads, Li-Rong Yu, David A Lucas, Ming Zhou, King C Chan, Carl F Schaefer

Electrophoresis· May 2004

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Pathway databases.
Carl F Schaefer

Ann N Y Acad Sci· May 2004

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Associations of postmenopausal hormone therapy with markers of hemostasis and inflammation and lipid profiles in diabetic and nondiabetic american Indian women: the strong heart study.
Ying Zhang, Barbara V Howard, Linda D Cowan, Thomas K Welty, Carl F Schaefer

J Womens Health (Larchmt)· March 2004

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Direct ampholyte-free liquid-phase isoelectric peptide focusing: application to the human serum proteome.
Zhen Xiao, Thomas P Conrads, David A Lucas, George M Janini, Carl F Schaefer

Electrophoresis· January 2004

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The cancer genome anatomy project: online resources to reveal the molecular signatures of cancer.
Robert L Strausberg, Kenneth H Buetow, Susan F Greenhut, Lynette H Grouse, Carl F Schaefer

Cancer Invest· December 2002

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Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Robert L Strausberg, Elise A Feingold, Lynette H Grouse, Jeffery G Derge, Richard D Klausner, Carl F Schaefer

Proc Natl Acad Sci U S A· December 2002

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An anatomy of normal and malignant gene expression.
Kathy Boon, Elisson C Osorio, Susan F Greenhut, Carl F Schaefer, Jennifer Shoemaker

Proc Natl Acad Sci U S A· August 2002

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The effect of estrogen use on levels of glucose and insulin and the risk of type 2 diabetes in american Indian postmenopausal women : the strong heart study.
Ying Zhang, Barbara V Howard, Linda D Cowan, Jeunliang Yeh, Carl F Schaefer

Diabetes Care· March 2002

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