Publications by authors named "Carol Ware"

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Derivation of Naïve Human Embryonic Stem Cells Using a CHK1 Inhibitor.
Carol B Ware, Erica C Jonlin, Donovan J Anderson, Christopher Cavanaugh, Jennifer Hesson

Stem Cell Rev Rep· November 2023

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Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data.
Hyeon-Jin Kim, Galip Gürkan Yardımcı, Giancarlo Bonora, Vijay Ramani, Jie Liu, Carol B Ware

PLoS Comput Biol· September 2020

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Metabolic Control over mTOR-Dependent Diapause-like State.
Abdiasis M Hussein, Yuliang Wang, Julie Mathieu, Lilyana Margaretha, Chaozhong Song, Carol B Ware

Dev Cell· January 2020

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Inducible CRISPR genome editing platform in naive human embryonic stem cells reveals JARID2 function in self-renewal.
Amy Ferreccio, Julie Mathieu, Damien Detraux, Logeshwaran Somasundaram, Christopher Cavanaugh, Carol Ware

Cell Cycle· September 2019

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Connexin 43 Functions as a Positive Regulator of Stem Cell Differentiation into Definitive Endoderm and Pancreatic Progenitors.
Wendy Yang, Paul D Lampe, Patricia Kensel-Hammes, Jennifer Hesson, Carol B Ware

iScience· September 2019

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PIXUL-ChIP: integrated high-throughput sample preparation and analytical platform for epigenetic studies.
Karol Bomsztyk, Daniel Mar, Yuliang Wang, Oleg Denisenko, Carol Ware

Nucleic Acids Res· July 2019

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Enhancer Chromatin and 3D Genome Architecture Changes from Naive to Primed Human Embryonic Stem Cell States.
Stephanie L Battle, Naresh Doni Jayavelu, Robert N Azad, Jennifer Hesson, Faria N Ahmed, Carol B Ware

Stem Cell Reports· May 2019

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Using DNase Hi-C techniques to map global and local three-dimensional genome architecture at high resolution.
Wenxiu Ma, Ferhat Ay, Choli Lee, Gunhan Gulsoy, Xinxian Deng, Carol B Ware

Methods· June 2018

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Epigenetic memory via concordant DNA methylation is inversely correlated to developmental potential of mammalian cells.
Minseung Choi, Diane P Genereux, Jamie Goodson, Haneen Al-Azzawi, Shannon Q Allain, Carol B Ware

PLoS Genet· November 2017

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Concise Review: Lessons from Naïve Human Pluripotent Cells.
Carol B Ware

Stem Cells· January 2017

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Conversion of Prostate Adenocarcinoma to Small Cell Carcinoma-Like by Reprogramming.
Gisely T Borges, Eneida F Vêncio, Sue-Ing Quek, Adeline Chen, Diego M Salvanha, Carol B Ware

J Cell Physiol· September 2016

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The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition.
Henrik Sperber, Julie Mathieu, Yuliang Wang, Amy Ferreccio, Jennifer Hesson, Carol B Ware

Nat Cell Biol· December 2015

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Naive embryonic stem cells: the future of stem cell research?
Carol B Ware

Regen Med· October 2015

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The GIPC1-Akt1 Pathway Is Required for the Specification of the Eye Field in Mouse Embryonic Stem Cells.
Anna La Torre, Akina Hoshino, Christopher Cavanaugh, Carol B Ware, Thomas A Reh

Stem Cells· September 2015

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Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells.
Edward J Grow, Ryan A Flynn, Shawn L Chavez, Nicholas L Bayless, Mark Wossidlo, Carol B Ware

Nature· June 2015

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Reprogramming of prostate cancer cells--technical challenges.
Gisely T Borges, Eneida F Vêncio, Ricardo Z N Vêncio, Robert L Vessella, Carol B Ware

Curr Urol Rep· January 2015

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Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes.
Wenxiu Ma, Ferhat Ay, Choli Lee, Gunhan Gulsoy, Xinxian Deng, Carol B Ware

Nat Methods· January 2015

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Derivation of naive human embryonic stem cells.
Carol B Ware, Angelique M Nelson, Brigham Mecham, Jennifer Hesson, Wenyu Zhou

Proc Natl Acad Sci U S A· March 2014

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Hypoxia induces re-entry of committed cells into pluripotency.
Julie Mathieu, Zhan Zhang, Angelique Nelson, Deepak A Lamba, Thomas A Reh, Carol Ware

Stem Cells· September 2013

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Developmentally programmed 3' CpG island methylation confers tissue- and cell-type-specific transcriptional activation.
Da-Hai Yu, Carol Ware, Robert A Waterland, Jiexin Zhang, Miao-Hsueh Chen

Mol Cell Biol· May 2013

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Lineage targeted MHC-II transgenic mice demonstrate the role of dendritic cells in bacterial-driven colitis.
Lillian Maggio-Price, Audrey Seamons, Helle Bielefeldt-Ohmann, Weiping Zeng, Thea Brabb, Carol Ware

Inflamm Bowel Dis· January 2013

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Reprogramming of prostate cancer-associated stromal cells to embryonic stem-like.
Eneida F Vêncio, Angelique M Nelson, Christopher Cavanaugh, Carol B Ware, Daniel G Milller

Prostate· September 2012

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HIF1α induced switch from bivalent to exclusively glycolytic metabolism during ESC-to-EpiSC/hESC transition.
Wenyu Zhou, Michael Choi, Daciana Margineantu, Lilyana Margaretha, Jennifer Hesson, Carol Ware

EMBO J· May 2012

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HIF induces human embryonic stem cell markers in cancer cells.
Julie Mathieu, Zhan Zhang, Wenyu Zhou, Amy J Wang, John M Heddleston, Carol Ware

Cancer Res· July 2011

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Lineage relationship of prostate cancer cell types based on gene expression.
Laura E Pascal, Ricardo Zn Vêncio, Robert L Vessella, Carol B Ware, Eneida F Vêncio

BMC Med Genomics· May 2011

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