Publications by authors named "Caroline Holmes"

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Optimization and variability can coexist.
Marianne Bauer, William Bialek, Chase Goddard, Caroline M Holmes, Kamesh Krishnamurthy

ArXiv· May 2025

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Inferring genotype-phenotype maps using attention models.
Krishna Rijal, Caroline M Holmes, Samantha Petti, Gautam Reddy, Michael M Desai

ArXiv· April 2025

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Stimulus-invariant aspects of the retinal code drive discriminability of natural scenes.
Benjamin D Hoshal, Caroline M Holmes, Kyle Bojanek, Jared M Salisbury, Michael J Berry

Proc Natl Acad Sci U S A· December 2024

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Protocol for fluorescent live-cell staining of tardigrades.
Clayton J Harry, Jonathan D Hibshman, Amor Damatac, Phillip L Davidson, Martin Andres Estermann, Caroline M Holmes

STAR Protoc· September 2024

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Stimulus invariant aspects of the retinal code drive discriminability of natural scenes.
Benjamin D Hoshal, Caroline M Holmes, Kyle Bojanek, Jared Salisbury, Michael J Berry

bioRxiv· July 2024

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Emergent scale-free networks.
Christopher W Lynn, Caroline M Holmes, Stephanie E Palmer

PNAS Nexus· July 2024

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Decomposing the Local Arrow of Time in Interacting Systems.
Christopher W Lynn, Caroline M Holmes, William Bialek, David J Schwab

Phys Rev Lett· September 2022

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Emergence of local irreversibility in complex interacting systems.
Christopher W Lynn, Caroline M Holmes, William Bialek, David J Schwab

Phys Rev E· September 2022

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Signatures of irreversibility in microscopic models of flocking.
Federica Ferretti, Simon Grosse-Holz, Caroline Holmes, Jordan L Shivers, Irene Giardina

Phys Rev E· September 2022

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A simple regulatory architecture allows learning the statistical structure of a changing environment.
Stefan Landmann, Caroline M Holmes, Mikhail Tikhonov

Elife· September 2021

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Estimation of mutual information for real-valued data with error bars and controlled bias.
Caroline M Holmes, Ilya Nemenman

Phys Rev E· August 2019

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Luria-Delbrück, revisited: the classic experiment does not rule out Lamarckian evolution.
Caroline M Holmes, Mahan Ghafari, Anzar Abbas, Varun Saravanan, Ilya Nemenman

Phys Biol· August 2017

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Motor control by precisely timed spike patterns.
Kyle H Srivastava, Caroline M Holmes, Michiel Vellema, Andrea R Pack, Coen P H Elemans

Proc Natl Acad Sci U S A· January 2017

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Advanced post-processing for scanned ultrasonic arrays: application to defect detection and classification in non-destructive evaluation.
Caroline Holmes, Bruce W Drinkwater, Paul D Wilcox

Ultrasonics· November 2008

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Advanced reflector characterization with ultrasonic phased arrays in NDE applications.
Paul D Wilcox, Caroline Holmes, Bruce W Drinkwater

IEEE Trans Ultrason Ferroelectr Freq Control· August 2007

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