Publications by authors named "Cesar Arze"

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Structure of anellovirus-like particles reveal a mechanism for immune evasion.
Shu-Hao Liou, Rajendra Boggavarapu, Noah R Cohen, Yue Zhang, Ishwari Sharma, Cesar Arze

Nat Commun· August 2024

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Comprehensive profiling of antibody responses to the human anellome using programmable phage display.
Thiagarajan Venkataraman, Harish Swaminathan, Cesar A Arze, Sarah M Jacobo, Agamoni Bhattacharyya

Cell Rep· December 2022

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Discovery of bioactive microbial gene products in inflammatory bowel disease.
Yancong Zhang, Amrisha Bhosle, Sena Bae, Lauren J McIver, Gleb Pishchany, Cesar Arze

Nature· June 2022

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Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation.
Daniel Podlesny, Cesar Arze, Elisabeth Dörner, Sandeep Verma, Sudhir Dutta

Microbiome· March 2022

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Global genome analysis reveals a vast and dynamic anellovirus landscape within the human virome.
Cesar A Arze, Simeon Springer, Gytis Dudas, Sneha Patel, Agamoni Bhattacharyya

Cell Host Microbe· August 2021

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Bacterial microbiota diversity and composition in red and white wines correlate with plant-derived DNA contributions and botrytis infection.
Alena M Bubeck, Lena Preiss, Anna Jung, Elisabeth Dörner, Daniel Podlesny, Cesar Arze

Sci Rep· August 2020

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Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men.
Long H Nguyen, Wenjie Ma, Dong D Wang, Yin Cao, Himel Mallick, Cesar Arze

Gastroenterology· April 2020

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Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases.
Jason Lloyd-Price, Cesar Arze, Ashwin N Ananthakrishnan, Melanie Schirmer, Julian Avila-Pacheco

Nature· May 2019

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Corrigendum: Allelic variation contributes to bacterial host specificity.
Min Yue, Xiangan Han, Leon De Masi, Chunhong Zhu, Xun Ma, Cesar Arze

Nat Commun· August 2017

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CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline.
Sonia Agrawal, Cesar Arze, Ricky S Adkins, Jonathan Crabtree, David Riley

BMC Genomics· April 2017

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Allelic variation contributes to bacterial host specificity.
Min Yue, Xiangan Han, Leon De Masi, Chunhong Zhu, Xun Ma, Cesar Arze

Nat Commun· October 2015

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A new method for estimating species age supports the coexistence of malaria parasites and their Mammalian hosts.
Joana C Silva, Amy Egan, Cesar Arze, John L Spouge, David G Harris

Mol Biol Evol· May 2015

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Independent emergence of artemisinin resistance mutations among Plasmodium falciparum in Southeast Asia.
Shannon Takala-Harrison, Christopher G Jacob, Cesar Arze, Michael P Cummings, Joana C Silva, Peter Starzengruber

J Infect Dis· March 2015

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Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data.
Warren A Kibbe, Cesar Arze, Victor Felix, Elvira Mitraka, Evan Bolton

Nucleic Acids Res· January 2015

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Polymorphisms in Plasmodium falciparum chloroquine resistance transporter and multidrug resistance 1 genes: parasite risk factors that affect treatment outcomes for P. falciparum malaria after artemether-lumefantrine and artesunate-amodiaquine.
Meera Venkatesan, Nahla B Gadalla, Kasia Stepniewska, Prabin Dahal, Christian Nsanzabana, Cesar Arze

Am J Trop Med Hyg· October 2014

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Genetic loci associated with delayed clearance of Plasmodium falciparum following artemisinin treatment in Southeast Asia.
Shannon Takala-Harrison, Taane G Clark, Christopher G Jacob, Michael P Cummings, Olivo Miotto, Peter Starzengruber, Cesar Arze

Proc Natl Acad Sci U S A· January 2013

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Disease Ontology: a backbone for disease semantic integration.
Lynn Marie Schriml, Cesar Arze, Suvarna Nadendla, Yu-Wei Wayne Chang, Mark Mazaitis

Nucleic Acids Res· January 2012

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CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing.
Samuel V Angiuoli, Malcolm Matalka, Aaron Gussman, Kevin Galens, Mahesh Vangala, Cesar Arze

BMC Bioinformatics· August 2011

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GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database.
Lynn M Schriml, Cesar Arze, Suvarna Nadendla, Anu Ganapathy, Victor Felix

Nucleic Acids Res· January 2010

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