Publications by authors named "Chaim Linhart"

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Fully Automated Artificial Intelligence Solution for Human Epidermal Growth Factor Receptor 2 Immunohistochemistry Scoring in Breast Cancer: A Multireader Study.
Savitri Krishnamurthy, Stuart J Schnitt, Anne Vincent-Salomon, Rita Canas-Marques, Eugenia Colon, Chaim Linhart

JCO Precis Oncol· October 2024

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Validation of prostate and breast cancer detection artificial intelligence algorithms for accurate histopathological diagnosis and grading: a retrospective study with a Japanese cohort.
Kris Lami, Han-Seung Yoon, Anil V Parwani, Hoa Hoang Ngoc Pham, Yuri Tachibana, Chaim Linhart

Pathology· August 2024

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Validation and real-world clinical application of an artificial intelligence algorithm for breast cancer detection in biopsies.
Judith Sandbank, Guillaume Bataillon, Alona Nudelman, Ira Krasnitsky, Rachel Mikulinsky, Chaim Linhart

NPJ Breast Cancer· December 2022

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An artificial intelligence algorithm for prostate cancer diagnosis in whole slide images of core needle biopsies: a blinded clinical validation and deployment study.
Liron Pantanowitz, Gabriela M Quiroga-Garza, Lilach Bien, Ronen Heled, Daphna Laifenfeld, Chaim Linhart

Lancet Digit Health· August 2020

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The EXPANDER Integrated Platform for Transcriptome Analysis.
Tom Aharon Hait, Adi Maron-Katz, Dorit Sagir, David Amar, Igor Ulitsky, Chaim Linhart

J Mol Biol· June 2019

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Assessment of algorithms for inferring positional weight matrix motifs of transcription factor binding sites using protein binding microarray data.
Yaron Orenstein, Chaim Linhart, Ron Shamir

PLoS One· March 2013

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A novel candidate cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans.
Chaim Linhart, Yonit Halperin, Amir Darom, Shahar Kidron, Limor Broday

Genome Res· January 2012

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Transcriptional modulation induced by ionizing radiation: p53 remains a central player.
Sharon Rashi-Elkeles, Ran Elkon, Seagull Shavit, Yaniv Lerenthal, Chaim Linhart

Mol Oncol· August 2011

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Large-scale analysis of chromosomal aberrations in cancer karyotypes reveals two distinct paths to aneuploidy.
Michal Ozery-Flato, Chaim Linhart, Luba Trakhtenbrot, Shai Izraeli, Ron Shamir

Genome Biol· June 2011

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Expander: from expression microarrays to networks and functions.
Igor Ulitsky, Adi Maron-Katz, Seagull Shavit, Dorit Sagir, Chaim Linhart

Nat Protoc· February 2010

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Allegro: analyzing expression and sequence in concert to discover regulatory programs.
Yonit Halperin, Chaim Linhart, Igor Ulitsky, Ron Shamir

Nucleic Acids Res· April 2009

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Transcription factor and microRNA motif discovery: the Amadeus platform and a compendium of metazoan target sets.
Chaim Linhart, Yonit Halperin, Ron Shamir

Genome Res· July 2008

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Degenerate primer design: theoretical analysis and the HYDEN program.
Chaim Linhart, Ron Shamir

Methods Mol Biol· November 2007

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Functional genomic delineation of TLR-induced transcriptional networks.
Ran Elkon, Chaim Linhart, Yonit Halperin, Yosef Shiloh, Ron Shamir

BMC Genomics· October 2007

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Dissection of a DNA-damage-induced transcriptional network using a combination of microarrays, RNA interference and computational promoter analysis.
Ran Elkon, Sharon Rashi-Elkeles, Yaniv Lerenthal, Chaim Linhart, Tamar Tenne

Genome Biol· May 2006

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Deciphering transcriptional regulatory elements that encode specific cell cycle phasing by comparative genomics analysis.
Chaim Linhart, Ran Elkon, Yosef Shiloh, Ron Shamir

Cell Cycle· December 2005

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EXPANDER--an integrative program suite for microarray data analysis.
Ron Shamir, Adi Maron-Katz, Amos Tanay, Chaim Linhart, Israel Steinfeld

BMC Bioinformatics· September 2005

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The degenerate primer design problem: theory and applications.
Chaim Linhart, Ron Shamir

J Comput Biol· May 2005

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The degenerate primer design problem.
Chaim Linhart, Ron Shamir

Bioinformatics· October 2004

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In silico identification of transcriptional regulators associated with c-Myc.
Ran Elkon, Karen I Zeller, Chaim Linhart, Chi V Dang, Ron Shamir

Nucleic Acids Res· September 2004

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The canine olfactory subgenome.
Tsviya Olender, Tania Fuchs, Chaim Linhart, Ron Shamir, Mark Adams

Genomics· March 2004

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Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells.
Ran Elkon, Chaim Linhart, Roded Sharan, Ron Shamir, Yosef Shiloh

Genome Res· May 2003

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DEFOG: a practical scheme for deciphering families of genes.
Tania Fuchs, Barbora Malecova, Chaim Linhart, Roded Sharan, Miriam Khen

Genomics· September 2002

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