Publications by authors named "Changxin Wan"

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Pseudotimecascade visualizes gene expression cascade in pseudotime analysis.
Changxin Wan, Beijie Ji, Zhicheng Ji

bioRxiv· November 2025

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EpiFoundation: A Foundation Model for Single-Cell ATAC-seq via Peak-to-Gene Alignment.
Juncheng Wu, Changxin Wan, Zhicheng Ji, Yuyin Zhou, Wenpin Hou

bioRxiv· September 2025

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Vascular adhesion molecule 1 fibro-adipogenic progenitors mark fatty infiltration in chronic limb-threatening ischemia.
Qunsheng Dai, Changxin Wan, Yueyuan Xu, Kaileen Fei, Lindsey A Olivere

JVS Vasc Sci· September 2025

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Smmit: A pipeline for integrating multiple single-cell multi-omics samples.
Changxin Wan, Zhicheng Ji

Comput Struct Biotechnol J· September 2025

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Comparative analysis of gene regulation in single cells using Compass.
Changxin Wan, Yilong Qu, Zhiyou Ye, Tianbei Zhang, Huifang Ma

Cell Rep Methods· May 2025

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Integrating multiple single-cell multi-omics samples with Smmit.
Changxin Wan, Zhicheng Ji

bioRxiv· January 2025

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Erosion-Corrosion Behavior of 316L Stainless Steel in Chloropropene.
Yingying Dai, Changxin Wan, Shuai Yan, Guandong Wang, Yan Yang

Materials (Basel)· December 2024

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Vcam1+ Fibro-adipogenic Progenitors Mark Fatty Infiltration in Chronic Limb Threatening Ischemia.
Qunsheng Dai, Changxin Wan, Yueyuan Xu, Kaileen Fei, Lindsey A Olivere

bioRxiv· July 2024

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Effect of external electric field on the electronic properties of the AlAs/SiC van der Waals heterostructure.
Zicheng Zhang, Changxin Wan, Heng Li, Chunsheng Liu, Lan Meng

Phys Chem Chem Phys· October 2023

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Nuclear PTEN Regulates Thymidylate Biosynthesis in Human Prostate Cancer Cell Lines.
Zoe N Loh, Mu-En Wang, Changxin Wan, John M Asara, Zhicheng Ji

Metabolites· August 2023

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The crescent-like Golgi ribbon is shaped by the Ajuba/PRMT5/Aurora-A complex-modified HURP.
Shao-Chih Chiu, Xin-Ting Yang, Tong-You Wade Wei, Yu-Ting Amber Liao, Jo-Mei Maureen Chen, Chang-Xin Wan

Cell Commun Signal· June 2023

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MetaTiME integrates single-cell gene expression to characterize the meta-components of the tumor immune microenvironment.
Yi Zhang, Guanjue Xiang, Alva Yijia Jiang, Allen Lynch, Zexian Zeng, Chenfei Wang, Changxin Wan

Nat Commun· May 2023

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Enhanced Efficacy of Simultaneous PD-1 and PD-L1 Immune Checkpoint Blockade in High-Grade Serous Ovarian Cancer.
Changxin Wan, Matthew P Keany, Han Dong, Linah F Al-Alem, Unnati M Pandya

Cancer Res· January 2021

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Integrative analyses of single-cell transcriptome and regulome using MAESTRO.
Chenfei Wang, Dongqing Sun, Xin Huang, Changxin Wan, Ziyi Li

Genome Biol· August 2020

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Determinants of transcription factor regulatory range.
Chen-Hao Chen, Rongbin Zheng, Collin Tokheim, Xin Dong, Jingyu Fan, Changxin Wan

Nat Commun· May 2020

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Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data.
Qian Qin, Jingyu Fan, Rongbin Zheng, Changxin Wan, Shenglin Mei

Genome Biol· February 2020

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Large-scale public data reuse to model immunotherapy response and resistance.
Jingxin Fu, Karen Li, Wubing Zhang, Changxin Wan, Jing Zhang

Genome Med· February 2020

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Overexpression of Aurora-A bypasses cytokinesis through phosphorylation of suppressed in lung cancer.
Shao-Chih Chiu, Kun-Chieh Chen, Jiun-Yi Hsia, Cheng-Yen Chuang, Chang-Xin Wan

Am J Physiol Cell Physiol· September 2019

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Cistrome-GO: a web server for functional enrichment analysis of transcription factor ChIP-seq peaks.
Shaojuan Li, Changxin Wan, Rongbin Zheng, Jingyu Fan, Xin Dong

Nucleic Acids Res· July 2019

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Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis.
Rongbin Zheng, Changxin Wan, Shenglin Mei, Qian Qin, Qiu Wu

Nucleic Acids Res· January 2019

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