Publications by authors named "Charles D Johnson"

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Late-life dietary folate restriction reduces biosynthesis without compromising healthspan in mice.
Heidi M Blank, Staci E Hammer, Laurel Boatright, Courtney Roberts, Katarina E Heyden, Charles D Johnson

Life Sci Alliance· October 2024

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Transcriptome profiling of two rice varieties reveals their molecular responses under high night-time temperature.
Wardah K Mustahsan, Yuya Liang, Abdul R Mohammed, Charles D Johnson, Endang M Septiningsih

PLoS One· October 2024

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Rapid Adaptation and Interspecific Introgression in the North American Crop Pest Helicoverpa zea.
Henry L North, Zhen Fu, Richard Metz, Matt A Stull, Charles D Johnson

Mol Biol Evol· July 2024

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Specific microRNAs in stallion spermatozoa are potential biomarkers of high functionality.
Nancy H Ing, Kranti Konganti, Noushin Ghaffar, Charles D Johnson, David W Forrest

Reprod Domest Anim· July 2024

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Late-life dietary folate restriction reduces biosynthetic processes without compromising healthspan in mice.
Heidi M Blank, Staci E Hammer, Laurel Boatright, Courtney Roberts, Katarina E Heyden, Charles D Johnson

bioRxiv· January 2024

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Genetic mapping and prediction for novel lesion mimic in maize demonstrates quantitative effects from genetic background, environment and epistasis.
Alper Adak, Seth C Murray, Claudia Irene Calderón, Valentina Infante, Jennifer Wilker, Charles D Johnson

Theor Appl Genet· June 2023

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Horn fly transcriptome data of ten populations from the southern United States with varying degrees and molecular mechanisms of pesticide resistance.
Kylie G Bendele, Felix D Guerrero, Kimberly H Lohmeyer, Lane D Foil, Richard P Metz, Charles D Johnson

Data Brief· June 2023

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Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress.
Ranjita Thapa, Rodante E Tabien, Charles D Johnson, Endang M Septiningsih

BMC Genomics· April 2023

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Transcriptome Analysis of Developing Grains from Wheat Cultivars TAM 111 and TAM 112 Reveal Cultivar-Specific Regulatory Networks.
Ze-Tian Fang, Rajan Kapoor, Aniruddha Datta, Shuyu Liu, Matthew A Stull, Charles D Johnson

Int J Mol Sci· October 2022

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Characterization of triatomine bloodmeal sources using direct Sanger sequencing and amplicon deep sequencing methods.
Sujata Balasubramanian, Rachel Curtis-Robles, Bhagath Chirra, Lisa D Auckland, Alan Mai, Charles D Johnson

Sci Rep· June 2022

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activates the host RIDD pathway to subvert BLOS1-directed immune defense.
Kelsey Michelle Wells, Kai He, Aseem Pandey, Ana Cabello, Dongmei Zhang, Charles D Johnson

Elife· May 2022

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A new strategy for using historical imbalanced yield data to conduct genome-wide association studies and develop genomic prediction models for wheat breeding.
Chenggen Chu, Shichen Wang, Jackie C Rudd, Amir M H Ibrahim, Qingwu Xue, Charles D Johnson

Mol Breed· April 2022

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Reference-Guided De Novo Genome Assembly to Dissect a QTL Region for Submergence Tolerance Derived from Ciherang-Sub1.
Yuya Liang, Shichen Wang, Chersty L Harper, Nithya K Subramanian, Rodante E Tabien, Charles D Johnson

Plants (Basel)· December 2021

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Genome-wide QTL mapping of yield and agronomic traits in two widely adapted winter wheat cultivars from multiple mega-environments.
Smit Dhakal, Xiaoxiao Liu, Chenggen Chu, Yan Yang, Jackie C Rudd, Charles D Johnson

PeerJ· November 2021

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Case Report: Paucisymptomatic College-Age Population as a Reservoir for Potentially Neutralization-Resistant Severe Acute Respiratory Syndrome Coronavirus 2 Variants.
Benjamin W Neuman, Wesley A Brashear, Marcel Brun, Sankar P Chaki, Rebecca S B Fischer, Charles D Johnson

Am J Trop Med Hyg· September 2021

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Raw pacific biosciences and illumina sequencing reads and assembled genome data for the cattle ticks and .
Felix D Guerrero, Noushin Ghaffari, Kylie G Bendele, Richard P Metz, C Michael Dickens, Charles D Johnson

Data Brief· April 2021

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RNA-seq analysis reveals different drought tolerance mechanisms in two broadly adapted wheat cultivars 'TAM 111' and 'TAM 112'.
Chenggen Chu, Shichen Wang, Li Paetzold, Zhen Wang, Kele Hui, Charles D Johnson

Sci Rep· February 2021

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Genome wide identification of QTL associated with yield and yield components in two popular wheat cultivars TAM 111 and TAM 112.
Yan Yang, Smit Dhakal, Chenggen Chu, Shichen Wang, Qingwu Xue, Charles D Johnson

PLoS One· January 2021

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Identification and quantification of coding and long non-coding RNAs in stallion spermatozoa separated by density.
Nancy H Ing, Kranti Konganti, Noushin Ghaffari, Charles D Johnson, David W Forrest

Andrology· September 2020

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Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae.
Chenxi Qiu, Huiyan Jin, Irina Vvedenskaya, Jordi Abante Llenas, Tingting Zhao, Charles D Johnson

Genome Biol· June 2020

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Accurate Genomic Predictions for Chronic Wasting Disease in U.S. White-Tailed Deer.
Christopher M Seabury, David L Oldeschulte, Eric K Bhattarai, Dhruti Legare, Pamela J Ferro, Charles D Johnson

G3 (Bethesda)· April 2020

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The Pacific Biosciences assembled genome dataset from a parthenogenetic New Zealand wild population of the longhorned tick, Neumann, 1901.
Felix D Guerrero, Kylie G Bendele, Noushin Ghaffari, Joseph Guhlin, Kristene R Gedye, Charles D Johnson

Data Brief· December 2019

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Examining De Novo Transcriptome Assemblies via a Quality Assessment Pipeline.
Noushin Ghaffari, Osama A Arshad, Hyundoo Jeong, John Thiltges, Michael F Criscitiello, Charles D Johnson

IEEE/ACM Trans Comput Biol Bioinform· February 2019

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Young and aged TLR4 deficient mice show sex-dependent enhancements in spatial memory and alterations in interleukin-1 related genes.
Opal V Potter, Megan E Giedraitis, Charles D Johnson, Mackenzie N Cox, Rachel A Kohman

Brain Behav Immun· February 2019

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Horse Y chromosome assembly displays unique evolutionary features and putative stallion fertility genes.
Jan E Janečka, Brian W Davis, Sharmila Ghosh, Nandina Paria, Pranab J Das, Charles D Johnson

Nat Commun· July 2018

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