Publications by authors named "Chie Shindo"

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Complete genome sequences of five strains isolated from two shallow eutrophic lakes in Japan.
Rina Kurokawa, Keiji Watanabe, Yusuke Ogata, Shunsuke Takemine, Misa Takagi, Chie Shindo

Microbiol Resour Announc· December 2025

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Thermophile-fermented feed modulates the gut microbiota related to lactate metabolism in pigs.
Shota Yoshikawa, Kaede Itaya, Ryo Hoshina, Yukihiro Tashiro, Wataru Suda, Chie Shindo

J Appl Microbiol· October 2024

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Alteration of shoaling behavior and dysbiosis in the gut of medaka (Oryzias latipes) exposed to 2-μm polystyrene microplastics.
Yui Tamura, Yuki Takai, Hirokuni Miyamoto, Lee SeokHyun, Yangqing Liu, Chie Shindo

Chemosphere· April 2024

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Complete Genome Sequences of Three Polynucleobacter sp. Subcluster PnecC Strains, KF022, KF023, and KF032, Isolated from a Shallow Eutrophic Lake and a River in Japan.
Yusuke Ogata, Keiji Watanabe, Shusuke Takemine, Chie Shindo, Rina Kurokawa

Microbiol Resour Announc· March 2023

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Complete Genome Sequences of Three sp. (Lhab-A3) Strains, INBF002, TEGF004, and MORI2, Isolated from Two Lakes and a River in Japan.
Yusuke Ogata, Keiji Watanabe, Shusuke Takemine, Chie Shindo, Rina Kurokawa

Microbiol Resour Announc· March 2023

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An agroecological structure model of compost-soil-plant interactions for sustainable organic farming.
Hirokuni Miyamoto, Katsumi Shigeta, Wataru Suda, Yasunori Ichihashi, Naoto Nihei, Chie Shindo

ISME Commun· March 2023

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Computational estimation of sediment symbiotic bacterial structures of seagrasses overgrowing downstream of onshore aquaculture.
Hirokuni Miyamoto, Nobuhiro Kawachi, Atsushi Kurotani, Shigeharu Moriya, Wataru Suda, Chie Shindo

Environ Res· February 2023

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Whole-Genome Sequence of sp. Strain TEGAF015, Isolated from a Shallow Eutrophic Freshwater Lake in Japan.
Yusuke Ogata, Keiji Watanabe, Shusuke Takemine, Chie Shindo, Rina Kurokawa

Microbiol Resour Announc· November 2022

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A potential network structure of symbiotic bacteria involved in carbon and nitrogen metabolism of wood-utilizing insect larvae.
Hirokuni Miyamoto, Futo Asano, Koutarou Ishizawa, Wataru Suda, Hisashi Miyamoto, Chie Shindo

Sci Total Environ· August 2022

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Complete Genome Sequences of Two Flavobacterium ammonificans Strains and a Flavobacterium ammoniigenes Strain of Ammonifying Bacterioplankton Isolated from Surface River Water.
Wataru Suda, Yusuke Ogata, Chie Shindo, Keiji Watanabe

Microbiol Resour Announc· July 2022

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sp. nov. and sp. nov., ammonifying bacteria isolated from surface river water.
Keiji Watanabe, Tatsumi Kitamura, Yusuke Ogata, Chie Shindo, Wataru Suda

Int J Syst Evol Microbiol· March 2022

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Complete Genome and Plasmid Sequences of Three Fluviibacter phosphoraccumulans Polyphosphate-Accumulating Bacterioplankton Strains Isolated from Surface River Water.
Wataru Suda, Yusuke Ogata, Lena Takayasu, Chie Shindo, Keiji Watanabe

Microbiol Resour Announc· March 2021

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gen. nov., sp. nov., a polyphosphate-accumulating bacterium of fam. nov., isolated from surface river water.
Keiji Watanabe, Sho Morohoshi, Tadao Kunihiro, Yuichi Ishii, Lena Takayasu, Chie Shindo

Int J Syst Evol Microbiol· October 2020

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The influences of low protein diet on the intestinal microbiota of mice.
Hiroaki Masuoka, Wataru Suda, Eriko Tomitsuka, Chie Shindo, Lena Takayasu

Sci Rep· October 2020

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The effect of fecal microbiota transplantation on psychiatric symptoms among patients with irritable bowel syndrome, functional diarrhea and functional constipation: An open-label observational study.
Shunya Kurokawa, Taishiro Kishimoto, Shinta Mizuno, Tatsuhiro Masaoka, Makoto Naganuma, Chie Shindo

J Affect Disord· August 2018

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Aging-related changes in the diversity of women's skin microbiomes associated with oral bacteria.
Nakako Shibagaki, Wataru Suda, Cecile Clavaud, Philippe Bastien, Lena Takayasu, Chie Shindo

Sci Rep· September 2017

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Circadian oscillations of microbial and functional composition in the human salivary microbiome.
Lena Takayasu, Wataru Suda, Kageyasu Takanashi, Erica Iioka, Rina Kurokawa, Chie Shindo

DNA Res· June 2017

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Complete genome sequence of Bifidobacterium bifidum JCM 1255(T) isolated from feces of a breast-fed infant.
Hidetoshi Morita, Hidehiro Toh, Kenshiro Oshima, Akiyo Nakano, Chie Shindo

J Biotechnol· September 2015

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Complete Genome Sequence of Parascardovia denticolens JCM 12538T, Isolated from Human Dental Caries.
Kenshiro Oshima, Jun-Ichiro Hayashi, Hidehiro Toh, Akiyo Nakano, Chie Shindo

Genome Announc· May 2015

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