Publications by authors named "Chinyi Chu"

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A four-gene signature from blood to exclude bacterial etiology of lower respiratory tract infection in adults.
Ann R Falsey, Derick R Peterson, Edward E Walsh, Soumyaroop Bhattacharya, Andrea M Baran, Chinyi Chu

Nat Commun· November 2025

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Clinical Features and Gene Expression Patterns in Adults Hospitalized With Respiratory Syncytial Virus and Human Metapneumovirus Infection.
Colin Samoriski, Chin-Yi Chu, Ann R Falsey, Derick Peterson, Soumyaroop Bhattacharya

J Infect Dis· July 2025

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A Four-Gene Signature from Blood to Exclude Bacterial Etiology of Lower Respiratory Tract Infection in Adults.
Ann Falsey, Derick Peterson, Edward Walsh, Andrea Baran, Chin-Yi Chu

Res Sq· February 2025

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Single-cell analysis of lung epithelial cells reveals age and cell population-specific responses to SARS-CoV-2 infection in ciliated cells.
Raven M Osborn, Christopher S Anderson, Justin R Leach, ChinYi Chu, Stephen Dewhurst

Clin Exp Immunol· January 2025

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Association of disease severity and genetic variation during primary Respiratory Syncytial Virus infections.
William Bender, Yun Zhang, Anthony Corbett, Chinyi Chu, Alexander Grier

BMC Med Genomics· June 2024

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Bulk RNA sequencing of human pediatric lung cell populations reveals unique transcriptomic signature associated with postnatal pulmonary development.
Gautam Bandyopadhyay, Matthew G Jehrio, Cameron Baker, Soumyaroop Bhattacharya, Ravi S Misra, ChinYi Chu

Am J Physiol Lung Cell Mol Physiol· May 2024

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Single-cell resolution of human airway epithelial cells exposed to bronchiolitis obliterans-associated chemicals.
Chin-Yi Chu, So-Young Kim, Gloria S Pryhuber, Thomas J Mariani, Matthew D McGraw

Am J Physiol Lung Cell Mol Physiol· February 2024

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Preparation of noninfectious scRNAseq samples from SARS-CoV-2-infected epithelial cells.
Raven M Osborn, Justin Leach, Michelle Zanche, John M Ashton, ChinYi Chu

PLoS One· February 2023

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A systems genomics approach uncovers molecular associates of RSV severity.
Matthew N McCall, Chin-Yi Chu, Lu Wang, Lauren Benoodt, Juilee Thakar

PLoS Comput Biol· December 2021

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Airway Gene Expression Correlates of Respiratory Syncytial Virus Disease Severity and Microbiome Composition in Infants.
Chin-Yi Chu, Xing Qiu, Matthew N McCall, Lu Wang, Anthony Corbett

J Infect Dis· May 2021

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Airway gene-expression classifiers for respiratory syncytial virus (RSV) disease severity in infants.
Lu Wang, Chin-Yi Chu, Matthew N McCall, Christopher Slaunwhite, Jeanne Holden-Wiltse

BMC Med Genomics· February 2021

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Unbiased analysis of peripheral blood mononuclear cells reveals CD4 T cell response to RSV matrix protein.
Juilee Thakar, Yu Qian, Lauren Benoodt, David Roumanes, Xing Qiu, ChinYi Chu

Vaccine X· August 2020

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CX3CR1 as a respiratory syncytial virus receptor in pediatric human lung.
Christopher S Anderson, Chin-Yi Chu, Qian Wang, Jared A Mereness, Yue Ren

Pediatr Res· April 2020

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Microbiome-Transcriptome Interactions Related to Severity of Respiratory Syncytial Virus Infection.
Abhijeet R Sonawane, Liang Tian, Chin-Yi Chu, Xing Qiu, Lu Wang

Sci Rep· September 2019

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Aims, Study Design, and Enrollment Results From the Assessing Predictors of Infant Respiratory Syncytial Virus Effects and Severity Study.
Edward E Walsh, Thomas J Mariani, ChinYi Chu, Alex Grier, Steven R Gill

JMIR Res Protoc· June 2019

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Association of Dynamic Changes in the CD4 T-Cell Transcriptome With Disease Severity During Primary Respiratory Syncytial Virus Infection in Young Infants.
Thomas J Mariani, Xing Qiu, ChinYi Chu, Lu Wang, Juilee Thakar

J Infect Dis· November 2017

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The Healthy Infant Nasal Transcriptome: A Benchmark Study.
Chin-Yi Chu, Xing Qiu, Lu Wang, Soumyaroop Bhattacharya, Gerry Lofthus

Sci Rep· September 2016

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MicroRNA-494 is a master epigenetic regulator of multiple invasion-suppressor microRNAs by targeting ten eleven translocation 1 in invasive human hepatocellular carcinoma tumors.
Kuang-Hsiang Chuang, Christa L Whitney-Miller, Chin-Yi Chu, Zhongren Zhou, M Katherine Dokus

Hepatology· August 2015

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The genome-wide transcriptional response to neonatal hyperoxia identifies Ahr as a key regulator.
Soumyaroop Bhattacharya, Zhongyang Zhou, Min Yee, Chin-Yi Chu, Ashley M Lopez

Am J Physiol Lung Cell Mol Physiol· October 2014

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Neutropenia with impaired host defense against microbial infection in mice lacking androgen receptor.
Kuang-Hsiang Chuang, Saleh Altuwaijri, Gonghui Li, Jiann-Jyh Lai, Chin-Yi Chu

J Exp Med· May 2009

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Big results from small samples: evaluation of amplification protocols for gene expression profiling.
Agnes Viale, Juan Li, Jay Tiesman, Susan Hester, Aldo Massimi, Chin-Yi Chu

J Biomol Tech· July 2007

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9-cis-retinoic acid inhibits androgen receptor activity through activation of retinoid X receptor.
Kuang-Hsiang Chuang, Yi-Fen Lee, Wen-Jye Lin, Chin-Yi Chu, Saleh Altuwaijri

Mol Endocrinol· May 2005

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