Publications by authors named "Christian Quast"

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SILVA in 2026: a global core biodata resource for rRNA within the DSMZ digital diversity.
Maria Chuvochina, Jan Gerken, Martinique Frentrup, Yeliz Sandikci, Robin Goldmann, Christian Quast

Nucleic Acids Res· November 2025

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Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR.
Robert M Waterhouse, Anne-Françoise Adam-Blondon, Donat Agosti, Petr Baldrian, Bachir Balech, Christian Quast

F1000Res· August 2022

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Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
Gerhard Mayer, Wolfgang Müller, Karin Schork, Julian Uszkoreit, Andreas Weidemann, Christian Quast

Brief Bioinform· September 2021

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Analysis of Bacterial Communities on North Sea Macroalgae and Characterization of the Isolated Planctomycetes gen. nov., sp. nov., sp. nov., sp. nov. and sp. nov.
Sandra Wiegand, Patrick Rast, Nicolai Kallscheuer, Mareike Jogler, Anja Heuer, Christian Quast

Microorganisms· July 2021

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Analysis of bacterial communities in a municipal duck pond during a phytoplankton bloom and isolation of Anatilimnocola aggregata gen. nov., sp. nov., Lacipirellula limnantheis sp. nov. and Urbifossiella limnaea gen. nov., sp. nov. belonging to the phylum Planctomycetes.
Nicolai Kallscheuer, Patrick Rast, Mareike Jogler, Sandra Wiegand, Timo Kohn, Christian Quast

Environ Microbiol· March 2021

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A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects.
Gerhard Mayer, Christian Quast, Janine Felden, Matthias Lange, Manuel Prinz

Brief Bioinform· July 2019

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On-Site Analysis of Bacterial Communities of the Ultraoligotrophic South Pacific Gyre.
Greta Reintjes, Halina E Tegetmeyer, Miriam Bürgisser, Sandi Orlić, Ivo Tews, Christian Quast

Appl Environ Microbiol· July 2019

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25 years of serving the community with ribosomal RNA gene reference databases and tools.
Frank Oliver Glöckner, Pelin Yilmaz, Christian Quast, Jan Gerken, Alan Beccati

J Biotechnol· November 2017

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SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees.
Alan Beccati, Jan Gerken, Christian Quast, Pelin Yilmaz, Frank Oliver Glöckner

BMC Bioinformatics· September 2017

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UniEuk: Time to Speak a Common Language in Protistology!
Cédric Berney, Andreea Ciuprina, Sara Bender, Juliet Brodie, Virginia Edgcomb, Christian Quast

J Eukaryot Microbiol· May 2017

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Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes borbonicus on La Réunion Island.
Jan M Meyer, Praveen Baskaran, Christian Quast, Vladislav Susoy, Christian Rödelsperger

Environ Microbiol· April 2017

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Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms.
Hanno Teeling, Bernhard M Fuchs, Christin M Bennke, Karen Krüger, Meghan Chafee, Christian Quast

Elife· April 2016

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Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing.
Anna Kopf, Ivaylo Kostadinov, Antje Wichels, Christian Quast, Frank Oliver Glöckner

Mar Genomics· February 2015

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Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing.
Anna Klindworth, Alexander J Mann, Sixing Huang, Antje Wichels, Christian Quast

Mar Genomics· December 2014

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The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks.
Pelin Yilmaz, Laura Wegener Parfrey, Pablo Yarza, Jan Gerken, Elmar Pruesse, Christian Quast

Nucleic Acids Res· January 2014

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Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies.
Anna Klindworth, Elmar Pruesse, Timmy Schweer, Jörg Peplies, Christian Quast

Nucleic Acids Res· January 2013

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.
Christian Quast, Elmar Pruesse, Pelin Yilmaz, Jan Gerken, Timmy Schweer

Nucleic Acids Res· January 2013

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Microbial and chemical characterization of underwater fresh water springs in the Dead Sea.
Danny Ionescu, Christian Siebert, Lubos Polerecky, Yaniv Y Munwes, Christian Lott, Christian Quast

PLoS One· October 2012

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Ecological structuring of bacterial and archaeal taxa in surface ocean waters.
Pelin Yilmaz, Morten H Iversen, Wolfgang Hankeln, Renzo Kottmann, Christian Quast

FEMS Microbiol Ecol· August 2012

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Analysis of 23S rRNA genes in metagenomes - a case study from the Global Ocean Sampling Expedition.
Pelin Yilmaz, Renzo Kottmann, Elmar Pruesse, Christian Quast, Frank Oliver Glöckner

Syst Appl Microbiol· September 2011

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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.
Pelin Yilmaz, Renzo Kottmann, Dawn Field, Rob Knight, James R Cole, Christian Quast

Nat Biotechnol· May 2011

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Transcriptional response of the model planctomycete Rhodopirellula baltica SH1(T) to changing environmental conditions.
Patricia Wecker, Christine Klockow, Andreas Ellrott, Christian Quast, Philipp Langhammer

BMC Genomics· September 2009

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SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB.
Elmar Pruesse, Christian Quast, Katrin Knittel, Bernhard M Fuchs, Wolfgang Ludwig

Nucleic Acids Res· January 2008

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Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis.
Bernhard M Fuchs, Stefan Spring, Hanno Teeling, Christian Quast, Jörg Wulf

Proc Natl Acad Sci U S A· February 2007

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Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter.
Margarete Bauer, Michael Kube, Hanno Teeling, Michael Richter, Thierry Lombardot, Christian Quast

Environ Microbiol· December 2006

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