Publications by authors named "Christophe Herman"

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Chemical modulation of gut bacterial metabolism induces colanic acid and extends the lifespan of nematode and mammalian hosts.
Guo Hu, Marzia Savini, Matthew Brandon Cooke, Xin Wei, Dinghuan Deng, Christophe Herman

PLoS Biol· November 2025

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Transcription-replication collisions trigger high-fidelity replication reset.
Matthew B Cooke, Kobie T Welch, Laura Deus Ramirez, Katelin M Hagstrom, Alice X Wen, Christophe Herman

Nucleic Acids Res· November 2025

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GoldenBraid2.0 : a comprehensive and characterized toolkit for enterics.
Matthew B Cooke, Kobie T Welch, Laura D Ramirez, Alice X Wen, David C Marciano, Christophe Herman

Synth Biol (Oxf)· August 2025

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Endogenous DNA damage at sites of terminated transcripts.
Jingjing Liu, Jullian O Perren, Cody M Rogers, Sadeieh Nimer, Alice X Wen, Christophe Herman

Nature· April 2025

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Clues to transcription/replication collision-induced DNA damage: it was RNAP, in the chromosome, with the fork.
Matthew B Cooke, Christophe Herman, Priya Sivaramakrishnan

FEBS Lett· January 2025

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Horizontal gene transfer and beyond: the delivery of biological matter by bacterial membrane vesicles to host and bacterial cells.
Alice X Wen, Christophe Herman

Curr Opin Microbiol· October 2024

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Chemical Induction of Longevity-Promoting Colanic Acid in the Host's Microbiota.
Guo Hu, Matthew Brandon Cooke, Alice X Wen, Xin Yu, Jin Wang, Christophe Herman

bioRxiv· July 2024

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Targeted accurate RNA consensus sequencing (tARC-seq) reveals mechanisms of replication error affecting SARS-CoV-2 divergence.
Catherine C Bradley, Chen Wang, Alasdair J E Gordon, Alice X Wen, Pamela N Luna, Christophe Herman

Nat Microbiol· May 2024

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Drugging evolution of antibiotic resistance at a regulatory network hub.
Yin Zhai, John P Pribis, Sean W Dooling, Libertad Garcia-Villada, P J Minnick, Christophe Herman

Sci Adv· June 2023

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ppGpp and RNA-polymerase backtracking guide antibiotic-induced mutable gambler cells.
Yin Zhai, P J Minnick, John P Pribis, Libertad Garcia-Villada, P J Hastings, Christophe Herman

Mol Cell· April 2023

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Conjugation's Toolkit: the Roles of Nonstructural Proteins in Bacterial Sex.
Matthew B Cooke, Christophe Herman

J Bacteriol· March 2023

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RNA polymerase inaccuracy underlies SARS-CoV-2 variants and vaccine heterogeneity.
Catherine C Bradley, Alasdair J E Gordon, Chen Wang, Matthew B Cooke, Brendan F Kohrn, Christophe Herman

Res Sq· June 2022

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Evolutionary action of mutations reveals antimicrobial resistance genes in Escherichia coli.
David C Marciano, Chen Wang, Teng-Kuei Hsu, Thomas Bourquard, Benu Atri, Christophe Herman

Nat Commun· June 2022

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Metabolite Profiling Leads to the Development of an RNA Interference Strain for .
Isaiah A A Neve, Jessica N Sowa, Chih-Chun J Lin, Priya Sivaramakrishnan, Christophe Herman

G3 (Bethesda)· January 2020

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Transcription fidelity: New paradigms in epigenetic inheritance, genome instability and disease.
Catherine C Bradley, Alasdair J E Gordon, Jennifer A Halliday, Christophe Herman

DNA Repair (Amst)· September 2019

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Gamblers: An Antibiotic-Induced Evolvable Cell Subpopulation Differentiated by Reactive-Oxygen-Induced General Stress Response.
John P Pribis, Libertad García-Villada, Yin Zhai, Ohad Lewin-Epstein, Anthony Z Wang, Christophe Herman

Mol Cell· May 2019

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Bacteria-to-Human Protein Networks Reveal Origins of Endogenous DNA Damage.
Jun Xia, Li-Ya Chiu, Ralf B Nehring, María Angélica Bravo Núñez, Qian Mei, Christophe Herman

Cell· January 2019

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Transcription infidelity and genome integrity: the parallax view.
Alasdair J E Gordon, Priya Sivaramakrishnan, Jennifer A Halliday, Christophe Herman

Transcription· December 2018

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Fluorescent fusions of the N protein of phage Mu label DNA damage in living cells.
Matthew V Kotlajich, Jun Xia, Yin Zhai, Hsin-Yu Lin, Catherine C Bradley, Christophe Herman

DNA Repair (Amst)· December 2018

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How Acts of Infidelity Promote DNA Break Repair: Collision and Collusion Between DNA Repair and Transcription.
Priya Sivaramakrishnan, Alasdair J E Gordon, Jennifer A Halliday, Christophe Herman

Bioessays· October 2018

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CRISPR-FRT targets shared sites in a knock-out collection for off-the-shelf genome editing.
Toon Swings, David C Marciano, Benu Atri, Rachel E Bosserman, Chen Wang, Christophe Herman

Nat Commun· June 2018

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Microbial Genetic Composition Tunes Host Longevity.
Bing Han, Priya Sivaramakrishnan, Chih-Chun J Lin, Isaiah A A Neve, Jingquan He, Christophe Herman

Cell· May 2018

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DksA and ppGpp Regulate the σ Stress Response by Activating Promoters for the Small RNA DsrA and the Anti-Adapter Protein IraP.
Mary E Girard, Saumya Gopalkrishnan, Elicia D Grace, Jennifer A Halliday, Richard L Gourse, Christophe Herman

J Bacteriol· January 2018

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The transcription fidelity factor GreA impedes DNA break repair.
Priya Sivaramakrishnan, Leonardo A Sepúlveda, Jennifer A Halliday, Jingjing Liu, María Angélica Bravo Núñez, Christophe Herman

Nature· October 2017

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Microbial Genetic Composition Tunes Host Longevity.
Bing Han, Priya Sivaramakrishnan, Chih-Chun J Lin, Isaiah A A Neve, Jingquan He, Christophe Herman

Cell· June 2017

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