Publications by authors named "Cigdem Ak"

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Interpretable and integrative analysis of single-cell multiomics with scMKL.
Samuel D Kupp, Ian A VanGordon, Mehmet Gönen, Sadık Esener, Sebnem Ece Eksi, Çiğdem Ak

Commun Biol· August 2025

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AxonFinder: Automated segmentation of tumor innervating neuronal fibers.
Kaoutar Ait-Ahmad, Cigdem Ak, Guillaume Thibault, Young Hwan Chang, Sebnem Ece Eksi

Heliyon· January 2025

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Multiplex imaging of localized prostate tumors reveals altered spatial organization of AR-positive cells in the microenvironment.
Çiğdem Ak, Zeynep Sayar, Guillaume Thibault, Erik A Burlingame, M J Kuykendall

iScience· September 2024

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AxonFinder: Automated segmentation of tumor innervating neuronal fibers.
Kaoutar Ait-Ahmad, Cigdem Ak, Guillaume Thibault, Young Hwan Chang, Sebnem Ece Eksi

bioRxiv· September 2024

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Estrogen regulates divergent transcriptional and epigenetic cell states in breast cancer.
Aysegul Ors, Alex Daniel Chitsazan, Aaron Reid Doe, Ryan M Mulqueen, Cigdem Ak

Nucleic Acids Res· November 2022

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Spatial prediction of COVID-19 pandemic dynamics in the United States.
Çiğdem Ak, Alex D Chitsazan, Mehmet Gönen, Ruth Etzioni, Aaron J Grossberg

ISPRS Int J Geoinf· September 2022

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Fast and interpretable genomic data analysis using multiple approximate kernel learning.
Ayyüce Begüm Bektaş, Çiğdem Ak, Mehmet Gönen

Bioinformatics· June 2022

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Spatiotemporal prediction of infectious diseases using structured Gaussian processes with application to Crimean-Congo hemorrhagic fever.
Çiğdem Ak, Önder Ergönül, İrfan Şencan, Mehmet Ali Torunoğlu, Mehmet Gönen

PLoS Negl Trop Dis· August 2018

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