Publications by authors named "Colin A M Semple"

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Functional annotation of human long noncoding RNAs via molecular phenotyping.
Jordan A Ramilowski, Chi Wai Yip, Saumya Agrawal, Jen-Chien Chang, Yari Ciani, Colin A M Semple

Genome Res· July 2020

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Sequence-level mechanisms of human epigenome evolution.
James G D Prendergast, Emily V Chambers, Colin A M Semple

Genome Biol Evol· June 2014

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Properties of local interactions and their potential value in complementing genome-wide association studies.
Wenhua Wei, Attila Gyenesei, Colin A M Semple, Chris S Haley

PLoS One· April 2014

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The genomic signature of trait-associated variants.
Alida S D Kindt, Pau Navarro, Colin A M Semple, Chris S Haley

BMC Genomics· February 2013

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High-throughput analysis of epistasis in genome-wide association studies with BiForce.
Attila Gyenesei, Jonathan Moody, Colin A M Semple, Chris S Haley, Wen-Hua Wei

Bioinformatics· August 2012

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BiForce Toolbox: powerful high-throughput computational analysis of gene-gene interactions in genome-wide association studies.
Attila Gyenesei, Jonathan Moody, Asta Laiho, Colin A M Semple, Chris S Haley

Nucleic Acids Res· July 2012

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A genome-wide screen in human embryonic stem cells reveals novel sites of allele-specific histone modification associated with known disease loci.
James G D Prendergast, Pin Tong, David C Hay, Susan M Farrington, Colin A M Semple

Epigenetics Chromatin· May 2012

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Widespread signatures of recent selection linked to nucleosome positioning in the human lineage.
James G D Prendergast, Colin A M Semple

Genome Res· November 2011

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The retroviral proteinase active site and the N-terminus of Ddi1 are required for repression of protein secretion.
Rhian E White, J Richard Dickinson, Colin A M Semple, David J Powell, Colin Berry

FEBS Lett· January 2011

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Molecular biology. The structure of change.
Colin A M Semple, Martin S Taylor

Science· January 2009

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Rapidly evolving human promoter regions.
Martin S Taylor, Tim Massingham, Yoshihide Hayashizaki, Piero Carninci, Nick Goldman, Colin A M Semple

Nat Genet· November 2008

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Chromatin structure and evolution in the human genome.
James G D Prendergast, Harry Campbell, Nick Gilbert, Malcolm G Dunlop, Wendy A Bickmore, Colin A M Semple

BMC Evol Biol· May 2007

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Genome-wide analysis of mammalian promoter architecture and evolution.
Piero Carninci, Albin Sandelin, Boris Lenhard, Shintaro Katayama, Kazuro Shimokawa, Colin A M Semple

Nat Genet· June 2006

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Computational disease gene identification: a concert of methods prioritizes type 2 diabetes and obesity candidate genes.
Nicki Tiffin, Euan Adie, Frances Turner, Han G Brunner, Marc A van Driel, Colin A M Semple

Nucleic Acids Res· June 2006

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Heterotachy in mammalian promoter evolution.
Martin S Taylor, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Colin A M Semple

PLoS Genet· April 2006

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The complexity of selection at the major primate beta-defensin locus.
Colin A M Semple, Alison Maxwell, Philippe Gautier, Fiona M Kilanowski, Hayden Eastwood

BMC Evol Biol· May 2005

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Deep genomics in shallow times: the finished sequence of human chromosomes 13 and 19.
Colin A M Semple

Eur J Hum Genet· November 2004

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POCUS: mining genomic sequence annotation to predict disease genes.
Frances S Turner, Daniel R Clutterbuck, Colin A M Semple

Genome Biol· March 2004

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Duplication and selection in the evolution of primate beta-defensin genes.
Colin A M Semple, Mark Rolfe, Julia R Dorin

Genome Biol· July 2003

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The comparative proteomics of ubiquitination in mouse.
Colin A M Semple, ,

Genome Res· June 2003

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UBA domain containing proteins in fission yeast.
Rasmus Hartmann-Petersen, Colin A M Semple, Chris P Ponting, Klavs B Hendil, Colin Gordon

Int J Biochem Cell Biol· May 2003

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Signal sequence conservation and mature peptide divergence within subgroups of the murine beta-defensin gene family.
Gillian M Morrison, Colin A M Semple, Fiona M Kilanowski, Robert E Hill, Julia R Dorin

Mol Biol Evol· March 2003

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SNP genotyping on pooled DNAs: comparison of genotyping technologies and a semi automated method for data storage and analysis.
Stéphanie Le Hellard, Stéphane J Ballereau, Peter M Visscher, Helen S Torrance, Jeni Pinson, Colin A M Semple

Nucleic Acids Res· August 2002

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Sushi gets serious: the draft genome sequence of the pufferfish Fugu rubripes.
Martin S Taylor, Colin A M Semple

Genome Biol· August 2002

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Computational comparison of human genomic sequence assemblies for a region of chromosome 4.
Colin A M Semple, Stewart W Morris, David J Porteous, Kathryn L Evans

Genome Res· March 2002

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