Publications by authors named "Colin Farrell"

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Map of spiking activity underlying change detection in the mouse visual system.
Corbett Bennett, Sam Gale, Gregg Heller, Tamina Ramirez, Hannah Belski, Colin Farrell

bioRxiv· October 2025

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The Multi-State Epigenetic Pacemaker enables the identification of combinations of factors that influence DNA methylation.
Colin Farrell, Keshiv Tandon, Roberto Ferrari, Kalsuda Lapborisuth, Rahil Modi

Geroscience· April 2025

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A genome assembly and transcriptome atlas of the inbred Babraham pig to illuminate porcine immunogenetic variation.
John C Schwartz, Colin P Farrell, Graham Freimanis, Andrew K Sewell, John D Phillips

Immunogenetics· December 2024

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SHIELD: Skull-shaped hemispheric implants enabling large-scale electrophysiology datasets in the mouse brain.
Corbett Bennett, Ben Ouellette, Tamina K Ramirez, Alex Cahoon, Hannah Cabasco, Colin Farrell

Neuron· September 2024

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Non-coding RNA yREX3 from human extracellular vesicles exerts macrophage-mediated cardioprotection via a novel gene-methylating mechanism.
Alessandra Ciullo, Liang Li, Chang Li, Kara Tsi, Colin Farrell

Eur Heart J· August 2024

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Identifying epigenetic aging moderators using the epigenetic pacemaker.
Colin Farrell, Chanyue Hu, Kalsuda Lapborisuth, Kyle Pu, Sagi Snir

Front Bioinform· January 2024

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A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
Zizhen Yao, Cindy T J van Velthoven, Michael Kunst, Meng Zhang, Delissa McMillen, Colin Farrell

Nature· December 2023

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Connecting single-cell transcriptomes to projectomes in mouse visual cortex.
Staci A Sorensen, Nathan W Gouwens, Yun Wang, Matt Mallory, Agata Budzillo, Colin Farrell

bioRxiv· November 2023

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A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
Zizhen Yao, Cindy T J van Velthoven, Michael Kunst, Meng Zhang, Delissa McMillen, Colin Farrell

bioRxiv· March 2023

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Acute head-fixed recordings in awake mice with multiple Neuropixels probes.
Séverine Durand, Greggory R Heller, Tamina K Ramirez, Jennifer A Luviano, Allison Williford, Colin Farrell

Nat Protoc· February 2023

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DNA methylation profiles in pneumonia patients reflect changes in cell types and pneumonia severity.
Marco Morselli, Colin Farrell, Dennis Montoya, Tarık Gören, Ramazan Sabırlı

Epigenetics· December 2022

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The effects of age, sex, weight, and breed on canid methylomes.
Liudmilla Rubbi, Haoxuan Zhang, Junxi Feng, Christopher He, Patrick Kurnia, Colin Farrell

Epigenetics· November 2022

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Testing the association of relative growth rate and adaptation to climate across natural ecotypes of Arabidopsis.
Leila R Fletcher, Christine Scoffoni, Colin Farrell, Thomas N Buckley, Matteo Pellegrini

New Phytol· October 2022

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Metal content and kinetic properties of yeast RNA lariat debranching enzyme Dbr1.
Nathaniel E Clark, Adam Katolik, Allison J Taggart, Luke Buerer, Stephen P Holloway, Colin P Farrell

RNA· July 2022

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DNA Methylation-Based Prediction of Post-operative Atrial Fibrillation.
Matthew A Fischer, Aman Mahajan, Maximilian Cabaj, Todd H Kimball, Marco Morselli, Colin P Farrell

Front Cardiovasc Med· May 2022

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Hibernation slows epigenetic ageing in yellow-bellied marmots.
Gabriela M Pinho, Julien G A Martin, Colin Farrell, Amin Haghani, Joseph A Zoller

Nat Ecol Evol· April 2022

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Local connectivity and synaptic dynamics in mouse and human neocortex.
Luke Campagnola, Stephanie C Seeman, Thomas Chartrand, Lisa Kim, Alex Hoggarth, Colin Farrell

Science· March 2022

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ABCB6 polymorphisms are not overly represented in patients with porphyria.
Colin P Farrell, Gäel Nicolas, Robert J Desnick, Charles J Parker, Jerome Lamoril

Blood Adv· February 2022

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A complex network of interactions governs DNA methylation at telomeric regions.
Colin Farrell, María I Vaquero-Sedas, María D Cubiles, Michael Thompson, Alejandro Vega-Vaquero

Nucleic Acids Res· February 2022

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Pseudotime Analysis Reveals Exponential Trends in DNA Methylation Aging with Mortality Associated Timescales.
Kalsuda Lapborisuth, Colin Farrell, Matteo Pellegrini

Cells· February 2022

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Author Correction: Human neocortical expansion involves glutamatergic neuron diversification.
Jim Berg, Staci A Sorensen, Jonathan T Ting, Jeremy A Miller, Thomas Chartrand, Colin Farrell

Nature· January 2022

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Subpopulations of swine γδ T cells defined by TCRγ and WC1 gene expression.
Lauren Le Page, Alexandria Gillespie, John C Schwartz, Lisa-Maria Prawits, Angela Schlerka, Colin P Farrell

Dev Comp Immunol· December 2021

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Epigenetic models developed for plains zebras predict age in domestic horses and endangered equids.
Brenda Larison, Gabriela M Pinho, Amin Haghani, Joseph A Zoller, Caesar Z Li, Colin Farrell

Commun Biol· December 2021

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Human neocortical expansion involves glutamatergic neuron diversification.
Jim Berg, Staci A Sorensen, Jonathan T Ting, Jeremy A Miller, Thomas Chartrand, Colin Farrell

Nature· October 2021

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BiSulfite Bolt: A bisulfite sequencing analysis platform.
Colin Farrell, Michael Thompson, Anela Tosevska, Adewale Oyetunde, Matteo Pellegrini

Gigascience· May 2021

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