Publications by authors named "Conor Walker"

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Detecting Interspecific Positive Selection Using Convolutional Neural Networks.
Charlotte West, Conor R Walker, Shayesteh Arasti, Viacheslav Vasilev, Xingze Xu

Mol Biol Evol· July 2025

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Secure and scalable gene expression quantification with pQuant.
Seungwan Hong, Conor R Walker, Yoolim A Choi, Gamze Gürsoy

Nat Commun· March 2025

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Private information leakage from single-cell count matrices.
Conor R Walker, Xiaoting Li, Manav Chakravarthy, William Lounsbery-Scaife, Yoolim A Choi

Cell· November 2024

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Paired CRISPR screens to map gene regulation in and .
Xinhe Xue, Zoran Z Gajic, Christina M Caragine, Mateusz Legut, Conor Walker

bioRxiv· November 2024

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phastSim: Efficient simulation of sequence evolution for pandemic-scale datasets.
Nicola De Maio, William Boulton, Lukas Weilguny, Conor R Walker, Yatish Turakhia

PLoS Comput Biol· April 2022

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phastSim: efficient simulation of sequence evolution for pandemic-scale datasets.
Nicola De Maio, William Boulton, Lukas Weilguny, Conor R Walker, Yatish Turakhia

bioRxiv· September 2021

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Mutation Rates and Selection on Synonymous Mutations in SARS-CoV-2.
Nicola De Maio, Conor R Walker, Yatish Turakhia, Robert Lanfear, Russell Corbett-Detig

Genome Biol Evol· May 2021

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A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.
Simon Dellicour, Keith Durkin, Samuel L Hong, Bert Vanmechelen, Joan Martí-Carreras, Conor Walker

Mol Biol Evol· April 2021

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Short-range template switching in great ape genomes explored using pair hidden Markov models.
Conor R Walker, Aylwyn Scally, Nicola De Maio, Nick Goldman

PLoS Genet· March 2021

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Mutation rates and selection on synonymous mutations in SARS-CoV-2.
Nicola De Maio, Conor R Walker, Yatish Turakhia, Robert Lanfear, Russell Corbett-Detig

bioRxiv· January 2021

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Stability of SARS-CoV-2 phylogenies.
Yatish Turakhia, Nicola De Maio, Bryan Thornlow, Landen Gozashti, Robert Lanfear, Conor R Walker

PLoS Genet· November 2020

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