Publications by authors named "Conrad Oakes"

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Long-read sequencing transcriptome quantification with lr-kallisto.
Rebekah K Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Conrad Oakes

PLoS Comput Biol· December 2025

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High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes.
Emma L Peterman, Deon S Ploessl, Kasey S Love, Valeria Sanabria, Rachel F Daniels, Conrad G Oakes

Nucleic Acids Res· June 2025

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Long-read sequencing transcriptome quantification with lr-kallisto.
Rebekah K Loving, Delaney K Sullivan, A Sina Booeshagi, Fairlie Reese, Elisabeth Rebboah, Conrad Oakes

bioRxiv· January 2025

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Accurate quantification of nascent and mature RNAs from single-cell and single-nucleus RNA-seq.
Delaney K Sullivan, Kristján Eldjárn Hjörleifsson, Nikhila P Swarna, Conrad Oakes, Guillaume Holley

Nucleic Acids Res· January 2025

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Gene syntax defines supercoiling-mediated transcriptional feedback.
Christopher P Johnstone, Kasey S Love, Sneha R Kabaria, Ross Jones, Albert Blanch-Asensio, Conrad G Oakes

bioRxiv· January 2025

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High-resolution profiling reveals coupled transcriptional and translational regulation of transgenes.
Emma L Peterman, Deon S Ploessl, Kasey S Love, Valeria Sanabria, Rachel F Daniels, Conrad G Oakes

bioRxiv· December 2024

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Single-cell analysis of lizard blastema fibroblasts reveals phagocyte-dependent activation of Hedgehog-responsive chondrogenesis.
Ariel C Vonk, Xiaofan Zhao, Zheyu Pan, Megan L Hudnall, Conrad G Oakes

Nat Commun· August 2023

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Synthetic gene circuits as tools for drug discovery.
Adam M Beitz, Conrad G Oakes, Kate E Galloway

Trends Biotechnol· February 2022

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