Publications by authors named "Craig D Wenger"

Claim this Profile
P
Plotgardener: cultivating precise multi-panel figures in R.
Nicole E Kramer, Eric S Davis, Craig D Wenger, Erika M Deoudes, Sarah M Parker

Bioinformatics· March 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Bedtoolsr: An R package for genomic data analysis and manipulation.
Mayura N Patwardhan, Craig D Wenger, Eric S Davis, Douglas H Phanstiel

J Open Source Softw· December 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Global Post-Translational Modification Discovery.
Qiyao Li, Michael R Shortreed, Craig D Wenger, Brian L Frey, Leah V Schaffer

J Proteome Res· April 2017

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search.
Michael R Shortreed, Craig D Wenger, Brian L Frey, Gloria M Sheynkman, Mark Scalf

J Proteome Res· November 2015

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Amine-reactive neutron-encoded labels for highly plexed proteomic quantitation.
Alexander S Hebert, Anna E Merrill, Jonathan A Stefely, Derek J Bailey, Craig D Wenger

Mol Cell Proteomics· November 2013

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RNA-protein analysis using a conditional CRISPR nuclease.
Ho Young Lee, Rachel E Haurwitz, Alex Apffel, Kaihong Zhou, Brian Smart, Craig D Wenger

Proc Natl Acad Sci U S A· April 2013

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A proteomics search algorithm specifically designed for high-resolution tandem mass spectra.
Craig D Wenger, Joshua J Coon

J Proteome Res· March 2013

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Instant spectral assignment for advanced decision tree-driven mass spectrometry.
Derek J Bailey, Christopher M Rose, Graeme C McAlister, Justin Brumbaugh, Pengzhi Yu, Craig D Wenger

Proc Natl Acad Sci U S A· May 2012

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Characterizing peptide neutral losses induced by negative electron-transfer dissociation (NETD).
Neil G Rumachik, Graeme C McAlister, Jason D Russell, Derek J Bailey, Craig D Wenger

J Am Soc Mass Spectrom· April 2012

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging.
Craig D Wenger, M Violet Lee, Alexander S Hebert, Graeme C McAlister, Douglas H Phanstiel

Nat Methods· October 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Proteomic and phosphoproteomic comparison of human ES and iPS cells.
Douglas H Phanstiel, Justin Brumbaugh, Craig D Wenger, Shulan Tian, Mitchell D Probasco

Nat Methods· September 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A dynamic model of proteome changes reveals new roles for transcript alteration in yeast.
M Violet Lee, Scott E Topper, Shane L Hubler, James Hose, Craig D Wenger

Mol Syst Biol· July 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
COMPASS: a suite of pre- and post-search proteomics software tools for OMSSA.
Craig D Wenger, Douglas H Phanstiel, M Violet Lee, Derek J Bailey, Joshua J Coon

Proteomics· March 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Characterization and diagnostic value of amino acid side chain neutral losses following electron-transfer dissociation.
Qiangwei Xia, M Violet Lee, Christopher M Rose, Alyce J Marsh, Shane L Hubler, Craig D Wenger

J Am Soc Mass Spectrom· February 2011

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Intellinsity: a tool for visualization and analysis of liquid chromatography/tandem mass spectrometry sampling events.
Qiangwei Xia, David M Good, Craig D Wenger, Joshua J Coon

Rapid Commun Mass Spectrom· November 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Sub-part-per-million precursor and product mass accuracy for high-throughput proteomics on an electron transfer dissociation-enabled orbitrap mass spectrometer.
Craig D Wenger, Graeme C McAlister, Qiangwei Xia, Joshua J Coon

Mol Cell Proteomics· May 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
V
Value of using multiple proteases for large-scale mass spectrometry-based proteomics.
Danielle L Swaney, Craig D Wenger, Joshua J Coon

J Proteome Res· March 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The effect of interfering ions on search algorithm performance for electron-transfer dissociation data.
David M Good, Craig D Wenger, Joshua J Coon

Proteomics· January 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
L
Large-scale phosphoprotein analysis in Medicago truncatula roots provides insight into in vivo kinase activity in legumes.
Paul A Grimsrud, Désirée den Os, Craig D Wenger, Danielle L Swaney, Daniel Schwartz

Plant Physiol· January 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Analysis of tandem mass spectra by FTMS for improved large-scale proteomics with superior protein quantification.
Graeme C McAlister, Doug Phanstiel, Craig D Wenger, M Violet Lee, Joshua J Coon

Anal Chem· January 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Phosphoproteomics for the masses.
Paul A Grimsrud, Danielle L Swaney, Craig D Wenger, Nicole A Beauchene, Joshua J Coon

ACS Chem Biol· January 2010

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Top-down proteomics reveals novel protein forms expressed in Methanosarcina acetivorans.
Jonathan T Ferguson, Craig D Wenger, William W Metcalf, Neil L Kelleher

J Am Soc Mass Spectrom· September 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Post-acquisition ETD spectral processing for increased peptide identifications.
David M Good, Craig D Wenger, Graeme C McAlister, Dina L Bai, Donald F Hunt

J Am Soc Mass Spectrom· August 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Tandem mass spectrometry with ultrahigh mass accuracy clarifies peptide identification by database retrieval.
Michael T Boyne, Benjamin A Garcia, Mingxi Li, Leonid Zamdborg, Craig D Wenger

J Proteome Res· January 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry.
Danielle L Swaney, Craig D Wenger, James A Thomson, Joshua J Coon

Proc Natl Acad Sci U S A· January 2009

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis