Publications by authors named "Dan Ofer"

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Short-Term Prediction Model for Breast Cancer Risk Based on One Million Medical Records.
Ofer Feinstein, Dan Ofer, Eitan Bachmat, Sivan Gazit, Michal Linial

Clin Breast Cancer· December 2025

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Protein Language Models Expose Viral Immune Mimicry.
Dan Ofer, Michal Linial

Viruses· August 2025

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Automated annotation of disease subtypes.
Dan Ofer, Michal Linial

J Biomed Inform· June 2024

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Detecting anomalous proteins using deep representations.
Tomer Michael-Pitschaze, Niv Cohen, Dan Ofer, Yedid Hoshen, Michal Linial

NAR Genom Bioinform· March 2024

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What's next? Forecasting scientific research trends.
Dan Ofer, Hadasah Kaufman, Michal Linial

Heliyon· January 2024

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Inferring microRNA regulation: A proteome perspective.
Dan Ofer, Michal Linial

Front Mol Biosci· September 2022

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Revisiting the Risk Factors for Endometriosis: A Machine Learning Approach.
Ido Blass, Tali Sahar, Adi Shraibman, Dan Ofer, Nadav Rappoport

J Pers Med· July 2022

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ProteinBERT: a universal deep-learning model of protein sequence and function.
Nadav Brandes, Dan Ofer, Yam Peleg, Nadav Rappoport, Michal Linial

Bioinformatics· April 2022

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The language of proteins: NLP, machine learning & protein sequences.
Dan Ofer, Nadav Brandes, Michal Linial

Comput Struct Biotechnol J· March 2021

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ASAP: a machine learning framework for local protein properties.
Nadav Brandes, Dan Ofer, Michal Linial

Database (Oxford)· November 2017

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Overlooked Short Toxin-Like Proteins: A Shortcut to Drug Design.
Michal Linial, Nadav Rappoport, Dan Ofer

Toxins (Basel)· October 2017

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An expanded evaluation of protein function prediction methods shows an improvement in accuracy.
Yuxiang Jiang, Tal Ronnen Oron, Wyatt T Clark, Asma R Bankapur, Daniel D'Andrea, Dan Ofer

Genome Biol· September 2016

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ProFET: Feature engineering captures high-level protein functions.
Dan Ofer, Michal Linial

Bioinformatics· November 2015

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NeuroPID: a classifier of neuropeptide precursors.
Solange Karsenty, Nadav Rappoport, Dan Ofer, Adva Zair, Michal Linial

Nucleic Acids Res· July 2014

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NeuroPID: a predictor for identifying neuropeptide precursors from metazoan proteomes.
Dan Ofer, Michal Linial

Bioinformatics· April 2014

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Short toxin-like proteins attack the defense line of innate immunity.
Yitshak Tirosh, Dan Ofer, Tsiona Eliyahu, Michal Linial

Toxins (Basel)· July 2013

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