Publications by authors named "Daniel A Ashlock"

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Anchor Clustering for million-scale immune repertoire sequencing data.
Haiyang Chang, Daniel A Ashlock, Steffen P Graether, Stefan M Keller

BMC Bioinformatics· January 2024

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The difficulty of aligning intrinsically disordered protein sequences as assessed by conservation and phylogeny.
Andrew C Riley, Daniel A Ashlock, Steffen P Graether

PLoS One· July 2023

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Evolution of the modular, disordered stress proteins known as dehydrins.
Andrew C Riley, Daniel A Ashlock, Steffen P Graether

PLoS One· November 2019

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Development of antibiotic regimens using graph based evolutionary algorithms.
Steven M Corns, Daniel A Ashlock, Kenneth M Bryden

Biosystems· December 2013

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Floret-specific differences in gene expression and support for the hypothesis that tapetal degeneration of Zea mays L. occurs via programmed cell death.
David S Skibbe, Xiujuan Wang, Lisa A Borsuk, Daniel A Ashlock, Dan Nettleton

J Genet Genomics· October 2008

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Nearly identical paralogs: implications for maize (Zea mays L.) genome evolution.
Scott J Emrich, Li Li, Tsui-Jung Wen, Marna D Yandeau-Nelson, Yan Fu, Daniel A Ashlock

Genetics· January 2007

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Genetic dissection of intermated recombinant inbred lines using a new genetic map of maize.
Yan Fu, Tsui-Jung Wen, Yefim I Ronin, Hsin D Chen, Ling Guo, Daniel A Ashlock

Genetics· November 2006

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Quality assessment of maize assembled genomic islands (MAGIs) and large-scale experimental verification of predicted genes.
Yan Fu, Scott J Emrich, Ling Guo, Tsui-Jung Wen, Daniel A Ashlock

Proc Natl Acad Sci U S A· August 2005

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Evaluation of five ab initio gene prediction programs for the discovery of maize genes.
Hong Yao, Ling Guo, Yan Fu, Lisa A Borsuk, Tsui-Jung Wen, Daniel A Ashlock

Plant Mol Biol· February 2005

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A new resource for cereal genomics: 22K barley GeneChip comes of age.
Timothy J Close, Steve I Wanamaker, Rico A Caldo, Stacy M Turner, Daniel A Ashlock

Plant Physiol· March 2004

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A strategy for assembling the maize (Zea mays L.) genome.
Scott J Emrich, Srinivas Aluru, Yan Fu, Tsui-Jung Wen, Mahesh Narayanan, Daniel A Ashlock

Bioinformatics· January 2004

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DNA sequence-based "bar codes" for tracking the origins of expressed sequence tags from a maize cDNA library constructed using multiple mRNA sources.
Fang Qiu, Ling Guo, Tsui-Jung Wen, Feng Liu, Daniel A Ashlock

Plant Physiol· October 2003

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Alternative transcription initiation sites and polyadenylation sites are recruited during Mu suppression at the rf2a locus of maize.
Xiangqin Cui, An-Ping Hsia, Feng Liu, Daniel A Ashlock, Roger P Wise

Genetics· February 2003

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Maize Mu transposons are targeted to the 5' untranslated region of the gl8 gene and sequences flanking Mu target-site duplications exhibit nonrandom nucleotide composition throughout the genome.
Charles R Dietrich, Feng Cui, Mark L Packila, Jin Li, Daniel A Ashlock

Genetics· February 2002

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