Publications by authors named "Daniel A Pollard"

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Diversification of small RNA pathways underlies germline RNA interference incompetence in wild Caenorhabditis elegans strains.
Han Ting Chou, Francisco Valencia, Jacqueline C Alexander, Avery Davis Bell, Diptodip Deb, Daniel A Pollard

Genetics· January 2024

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Natural variation in codon bias and mRNA folding strength interact synergistically to modify protein expression in Saccharomyces cerevisiae.
Anastacia N Wienecke, Margaret L Barry, Daniel A Pollard

Genetics· August 2023

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Disruption of a ∼23-24 nucleotide small RNA pathway elevates DNA damage responses in .
Suzanne R Lee, Daniel A Pollard, Domenico F Galati, Megan L Kelly, Brian Miller

Mol Biol Cell· July 2021

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Empowering statistical methods for cellular and molecular biologists.
Daniel A Pollard, Thomas D Pollard, Katherine S Pollard

Mol Biol Cell· June 2019

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Resistance to germline RNA interference in a Caenorhabditis elegans wild isolate exhibits complexity and nonadditivity.
Daniel A Pollard, Matthew V Rockman

G3 (Bethesda)· June 2013

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Design and construction of recombinant inbred lines.
Daniel A Pollard

Methods Mol Biol· August 2012

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Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm.
Xiao-yong Li, Stewart MacArthur, Richard Bourgon, David Nix, Daniel A Pollard

PLoS Biol· February 2008

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Evolution of genes and genomes on the Drosophila phylogeny.

Nature· November 2007

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Large-scale turnover of functional transcription factor binding sites in Drosophila.
Alan M Moses, Daniel A Pollard, David A Nix, Venky N Iyer, Xiao-Yong Li

PLoS Comput Biol· October 2006

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Widespread discordance of gene trees with species tree in Drosophila: evidence for incomplete lineage sorting.
Daniel A Pollard, Venky N Iyer, Alan M Moses, Michael B Eisen

PLoS Genet· October 2006

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Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments.
Daniel A Pollard, Alan M Moses, Venky N Iyer, Michael B Eisen

BMC Bioinformatics· August 2006

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MONKEY: identifying conserved transcription-factor binding sites in multiple alignments using a binding site-specific evolutionary model.
Alan M Moses, Derek Y Chiang, Daniel A Pollard, Venky N Iyer, Michael B Eisen

Genome Biol· October 2005

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Benchmarking tools for the alignment of functional noncoding DNA.
Daniel A Pollard, Casey M Bergman, Jens Stoye, Susan E Celniker, Michael B Eisen

BMC Bioinformatics· January 2004

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