Publications by authors named "Daniel Bunis"

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A Transcriptomics-Based Computational Drug Repositioning Pipeline Identifies Simvastatin And Primaquine As Novel Therapeutics For Endometriosis Pain.
Tomiko T Oskotsky, Xinyu Tang, Erin Arthurs, Arpita Govil, Ferheen Abbasi, Daniel J Bunis

bioRxiv· May 2025

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Identifying therapeutic candidates for endometriosis through a transcriptomics-based drug repositioning approach.
Tomiko T Oskotsky, Arohee Bhoja, Daniel Bunis, Brian L Le, Alice S Tang

iScience· April 2024

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Homeostatic cytokines reciprocally modulate the emergence of prenatal effector PLZF+CD4+ T cells in humans.
Veronica Locher, Sara Park, Daniel G Bunis, Stephanie Makredes, Margareta Mayer

JCI Insight· November 2023

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Cyclone: an accessible pipeline to analyze, evaluate, and optimize multiparametric cytometry data.
Ravi K Patel, Rebecca G Jaszczak, Kwok Im, Nicholas D Carey, Tristan Courau, Daniel G Bunis

Front Immunol· September 2023

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Cyclone: an accessible pipeline to analyze, evaluate and optimize multiparametric cytometry data.
Ravi K Patel, Rebecca G Jaszczak, Im Kwok, Nicholas D Carey, Tristan Courau, Daniel Bunis

bioRxiv· March 2023

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HIV silencing and cell survival signatures in infected T cell reservoirs.
Iain C Clark, Prakriti Mudvari, Shravan Thaploo, Samuel Smith, Mohammad Abu-Laban, Daniel G Bunis

Nature· February 2023

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Multi-Modal Single-Cell Sequencing Identifies Cellular Immunophenotypes Associated With Juvenile Dermatomyositis Disease Activity.
Jessica Neely, George Hartoularos, Daniel Bunis, Yang Sun, David Lee

Front Immunol· July 2022

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Bioinformatics Analysis of Publicly Available Single-Nuclei Transcriptomics Alzheimer's Disease Datasets Reveals Genotype-Specific Changes Across Cell Types in Two Brain Regions.
Stella A Belonwu, Yaqiao Li, Daniel G Bunis, Arjun Arkal Rao, Caroline Warly Solsberg

Front Aging Neurosci· April 2022

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Whole-Tissue Deconvolution and scRNAseq Analysis Identify Altered Endometrial Cellular Compositions and Functionality Associated With Endometriosis.
Daniel G Bunis, Wanxin Wang, Júlia Vallvé-Juanico, Sahar Houshdaran, Sushmita Sen

Front Immunol· February 2022

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Sex-Stratified Single-Cell RNA-Seq Analysis Identifies Sex-Specific and Cell Type-Specific Transcriptional Responses in Alzheimer's Disease Across Two Brain Regions.
Stella A Belonwu, Yaqiao Li, Daniel Bunis, Arjun Arkal Rao, Caroline Warly Solsberg

Mol Neurobiol· January 2022

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Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19.
Brian L Le, Gaia Andreoletti, Tomiko Oskotsky, Albert Vallejo-Gracia, Romel Rosales, Daniel G Bunis

Sci Rep· June 2021

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dittoSeq: universal user-friendly single-cell and bulk RNA sequencing visualization toolkit.
Daniel G Bunis, Jared Andrews, Gabriela K Fragiadakis, Trevor D Burt, Marina Sirota

Bioinformatics· April 2021

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Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19.
Brian L Le, Gaia Andreoletti, Tomiko Oskotsky, Albert Vallejo-Gracia, Romel Rosales, Daniel G Bunis

Res Sq· March 2021

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Single-Cell Mapping of Progressive Fetal-to-Adult Transition in Human Naive T Cells.
Daniel G Bunis, Yelena Bronevetsky, Elisabeth Krow-Lucal, Nirav R Bhakta, Charles C Kim

Cell Rep· January 2021

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Multiple Origins of Virus Persistence during Natural Control of HIV Infection.
Eli A Boritz, Samuel Darko, Luke Swaszek, Gideon Wolf, David Wells, Daniel Bunis

Cell· August 2016

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