Publications by authors named "Daniel Jacobson"

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Building an expanded bio-based economy through synthetic biology.
Andrea M Garza Elizondo, Ilenne Del Valle Kessra, Erica Teixeira Prates, Evan Komp, Elise K Phillips, Daniel A Jacobson

Biotechnol Adv· December 2025

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Correction: Drought adaptation index (DAI) based on BLUP as a selection approach for drought-resilient switchgrass germplasm.
Shiva Om Makaju, Hari Bahadur Chhetri, Chanaka Roshan Abeyratne, Mirko Pavicic, Hari Poudel, Daniel Jacobson

Front Genet· November 2025

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Disruption of histone acetylation homeostasis reveals multilayered chromatin regulation for transcriptional resiliency.
Vrinda Venu, Eric M Small, Cullen Roth, Samantha H Adikari, Anna Hendrika Cornelia Vlot, Daniel Jacobson

Epigenetics Chromatin· October 2025

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Climate adaptation in Populus trichocarpa: key adaptive loci identified for stomata and leaf traits.
Marie C Klein, Zi Meng, Jack Bailey-Bale, Suzanne Milner, Peicai Shi, Daniel Jacobson

New Phytol· September 2025

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Genomic Surveillance Detection of SARS-CoV-1-Like Viruses in Rhinolophidae Bats, Bandarban Region, Bangladesh.
Christopher Bradburne, Ausraful Islam, Ian Bird, Elliott Abbott, Sarah Harrison, Daniel Jacobson

Emerg Infect Dis· August 2025

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Drought adaptation index (DAI) based on BLUP as a selection approach for drought-resilient switchgrass germplasm.
Shiva Om Makaju, Hari Bahadur Chhetri, Chanaka Roshan Abeyratne, Mirko Pavicic, Hari Poudel, Daniel Jacobson

Front Genet· August 2025

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Multiomic Network Analysis Identifies Dysregulated Neurobiological Pathways in Opioid Addiction.
Kyle A Sullivan, David Kainer, Matthew Lane, Mikaela Cashman, J Izaak Miller, Daniel A Jacobson

Biol Psychiatry· July 2025

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Omics Integration Uncovers Mechanisms Associated with HIV Viral Load and Potential Therapeutic Insights.
Kyle A Sullivan, Melyssa S Minto, Xinyu Zhang, William Carr, Bryan C Quach, Daniel A Jacobson

medRxiv· July 2025

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Predicting receptor-ligand pairing preferences in plant-microbe interfaces via molecular dynamics and machine learning.
Erica T Prates, Omar Demerdash, Manesh Shah, Tomás A Rush, Udaya C Kalluri, Daniel A Jacobson

Comput Struct Biotechnol J· June 2025

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Continuum limit of dendritic deposition.
Daniel Jacobson, Thomas F Miller

Phys Rev E· June 2025

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Utilizing plant synthetic biology to accelerate plant-microbe interactions research.
Xiaohan Yang, Joanna Tannous, Tomás A Rush, Ilenne Del Valle, Shunyuan Xiao, Daniel Jacobson

Biodes Res· June 2025

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Barrett's Esophagus in Time and Space: A Methylation Panel for Tracking Esophageal Cancer.
Daniel H Jacobson, Rebecca C Fitzgerald

Am J Gastroenterol· April 2025

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RWRtoolkit: multi-omic network analysis using random walks on multiplex networks in any species.
David Kainer, Matthew Lane, Kyle A Sullivan, J Izaak Miller, Mikaela Cashman, Daniel Jacobson

Gigascience· January 2025

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Morpho-physiological and transcriptomic responses of field pennycress to waterlogging.
Rachel Combs-Giroir, Manesh B Shah, Hari B Chhetri, Mallory Morgan, Erica Teixeira Prates, Daniel A Jacobson

Front Plant Sci· December 2024

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An emerging multi-omic understanding of the genetics of opioid addiction.
Eric O Johnson, Heidi S Fisher, Kyle A Sullivan, Olivia Corradin, Sandra Sanchez-Roige, Daniel A Jacobson

J Clin Invest· October 2024

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From Microbes to Microbiomes: Applications for Plant Health and Sustainable Agriculture.
Gwyn A Beattie, Kirsty L Bayliss, Daniel A Jacobson, Richard Broglie, Marleny Burkett-Cadena

Phytopathology· August 2024

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Author Correction: A multi-ancestry genetic study of pain intensity in 598,339 veterans.
Sylvanus Toikumo, Rachel Vickers-Smith, Zeal Jinwala, Heng Xu, Divya Saini, Daniel A Jacobson

Nat Med· July 2024

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MENTOR: Multiplex Embedding of Networks for Team-Based Omics Research.
Kyle A Sullivan, J Izaak Miller, Alice Townsend, Mallory Morgan, Matthew Lane, Daniel A Jacobson

bioRxiv· July 2024

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Estimating geographic variation of infection fatality ratios during epidemics.
Joshua Ladau, Eoin L Brodie, Nicola Falco, Ishan Bansal, Elijah B Hoffman, Daniel Jacobson

Infect Dis Model· June 2024

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Building an Adverse Outcome Pathway network for COVID-19.
Penny Nymark, Laure-Alix Clerbaux, Maria-João Amorim, Christos Andronis, Francesca de Bernardi, Daniel Jacobson

Front Syst Biol· June 2024

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Genetic underpinnings of arthropod community distributions in Populus trichocarpa.
Sandra J Simon, Anna Furches, Hari Chhetri, Luke Evans, Chanaka Roshan Abeyratne, Daniel Jacobson

New Phytol· May 2024

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A multi-ancestry genetic study of pain intensity in 598,339 veterans.
Sylvanus Toikumo, Rachel Vickers-Smith, Zeal Jinwala, Heng Xu, Divya Saini, Daniel A Jacobson

Nat Med· April 2024

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Discovery and Characterization of Fluopipamine, a Putative Cellulose Synthase 1 Antagonist within .
B Kirtley Amos, Victoria Pook, Erica Prates, Jozsef Stork, Manesh Shah, Daniel A Jacobson

J Agric Food Chem· February 2024

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Advances in the Application of Single-Cell Transcriptomics in Plant Systems and Synthetic Biology.
Md Torikul Islam, Yang Liu, Md Mahmudul Hassan, Paul E Abraham, Jean Merlet, Daniel Jacobson

Biodes Res· February 2024

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