Publications by authors named "Daniel MacLean"

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Comparison of four quick and reliable methods of assessing body fat appropriate for clinical settings among young, middle-age, and older healthy male and female adults.
Rafael F Escamilla, Kyle Yamashiro, Robert Asuncion, Daniel MacLean, Irwin Scott Thompson

J Phys Ther Sci· September 2024

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Effects of Ankle Position While Performing One- and Two-Leg Floor Bridging Exercises on Core and Lower Extremity Muscle Recruitment.
Rafael F Escamilla, Irwin S Thompson, Joe Carinci, Daniel MacLean, Lisa MacLean

Bioengineering (Basel)· April 2024

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Publisher Correction: The calcium-permeable channel OSCA1.3 regulates plant stomatal immunity.
Kathrin Thor, Shushu Jiang, Erwan Michard, Jeoffrey George, Sönke Scherzer, Daniel MacLean

Nature· December 2020

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The calcium-permeable channel OSCA1.3 regulates plant stomatal immunity.
Kathrin Thor, Shushu Jiang, Erwan Michard, Jeoffrey George, Sönke Scherzer, Daniel MacLean

Nature· September 2020

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Rapid fine mapping of causative mutations from sets of unordered, contig-sized fragments of genome sequence.
Ghanasyam Rallapalli, Pilar Corredor-Moreno, Edward Chalstrey, Martin Page, Daniel MacLean

BMC Bioinformatics· January 2019

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Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1.
Lennart Wirthmueller, Shuta Asai, Ghanasyam Rallapalli, Jan Sklenar, Georgina Fabro, Daniel MacLean

New Phytol· October 2018

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Plant immune and growth receptors share common signalling components but localise to distinct plasma membrane nanodomains.
Christoph A Bücherl, Iris K Jarsch, Christian Schudoma, Cécile Segonzac, Malick Mbengue, Daniel MacLean

Elife· March 2017

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The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers.
Manuel Corpas, Rafael C Jimenez, Erik Bongcam-Rudloff, Aidan Budd, Michelle D Brazas, Daniel MacLean

Bioinformatics· January 2015

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Coval: improving alignment quality and variant calling accuracy for next-generation sequencing data.
Shunichi Kosugi, Satoshi Natsume, Kentaro Yoshida, Daniel MacLean, Liliana Cano

PLoS One· June 2014

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EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics.
Ghanasyam Rallapalli, Eric M Kemen, Alexandre Robert-Seilaniantz, Cécile Segonzac, Graham J Etherington, Daniel MacLean

BMC Genomics· May 2014

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Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de bruijn graphs.
Richard M Leggett, Ricardo H Ramirez-Gonzalez, Walter Verweij, Cintia G Kawashima, Zamin Iqbal, Daniel Maclean

PLoS One· December 2013

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SVGenes: a library for rendering genomic features in scalable vector graphic format.
Graham J Etherington, Daniel MacLean

Bioinformatics· August 2013

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Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen.
David E L Cooke, Liliana M Cano, Sylvain Raffaele, Ruairidh A Bain, Louise R Cooke, Daniel MacLean

PLoS Pathog· April 2013

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Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors.
Dario Cantu, Vanesa Segovia, Daniel MacLean, Rosemary Bayles, Xianming Chen

BMC Genomics· April 2013

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Spatio-temporal cellular dynamics of the Arabidopsis flagellin receptor reveal activation status-dependent endosomal sorting.
Martina Beck, Ji Zhou, Christine Faulkner, Daniel MacLean, Silke Robatzek

Plant Cell· October 2012

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Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments.
Ricardo H Ramirez-Gonzalez, Raoul Bonnal, Mario Caccamo, Daniel Maclean

Source Code Biol Med· May 2012

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Big data in small places.
Daniel Maclean, Sophien Kamoun

Nat Biotechnol· January 2012

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Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS data.
Ricardo Ramirez-Gonzalez, Mario Caccamo, Daniel MacLean

Bioinformatics· October 2011

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The hyphal tip structure of Basidiobolus sp.: a zygomycete fungus of uncertain phylogeny.
Robert W Roberson, Evonne Saucedo, Daniel Maclean, Jeff Propster, Brant Unger

Fungal Biol· June 2011

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Genome evolution following host jumps in the Irish potato famine pathogen lineage.
Sylvain Raffaele, Rhys A Farrer, Liliana M Cano, David J Studholme, Daniel MacLean

Science· December 2010

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Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt.
David J Studholme, Eric Kemen, Daniel MacLean, Sebastian Schornack, Valente Aritua

FEMS Microbiol Lett· September 2010

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Disruption of two defensive signaling pathways by a viral RNA silencing suppressor.
Mathew G Lewsey, Alex M Murphy, Daniel Maclean, Neil Dalchau, Jack H Westwood

Mol Plant Microbe Interact· July 2010

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Evidence for large complex networks of plant short silencing RNAs.
Daniel MacLean, Nataliya Elina, Ericka R Havecker, Susanne B Heimstaedt, David J Studholme

PLoS One· March 2010

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Finding sRNA generative locales from high-throughput sequencing data with NiBLS.
Daniel MacLean, Vincent Moulton, David J Studholme

BMC Bioinformatics· February 2010

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A Boolean model of the Pseudomonas syringae hrp regulon predicts a tightly regulated system.
Daniel MacLean, David J Studholme

PLoS One· February 2010

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