Publications by authors named "Daniel Summerer"

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Advancing TET Inhibitor Development: From Structural Insights to Biological Evaluation.
Suzanne Willems, Lejla Maksumic, Janina Niggenaber, Tzu-Chen Lin, Tom Schulz, Daniel Summerer

ACS Med Chem Lett· May 2025

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Light-Activatable Ubiquitin for Studying Linkage-Specific Ubiquitin Chain Formation Kinetics.
Sudakshina Banerjee, Zeyneb Vildan Cakil, Kai Gallant, Johannes van den Boom, Shubhendu Palei, Daniel Summerer

Adv Sci (Weinh)· February 2025

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Evolved Readers of 5-Carboxylcytosine CpG Dyads Reveal a High Versatility of the Methyl-CpG-Binding Domain for Recognition of Noncanonical Epigenetic Marks.
Brinja Kosel, Katrin Bigler, Benjamin C Buchmuller, Suchandra R Acharyya, Rasmus Linser, Daniel Summerer

Angew Chem Int Ed Engl· April 2024

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Light-Activatable MBD-Readers of 5-Methylcytosine Reveal Domain-Dependent Chromatin Association Kinetics In Vivo.
Tzu-Chen Lin, Lena Engelhard, Benedikt Söldner, Rasmus Linser, Daniel Summerer

Adv Sci (Weinh)· March 2024

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Correction: A high-throughput effector screen identifies a novel small molecule scaffold for inhibition of ten-eleven translocation dioxygenase 2.
Shubhendu Palei, Jörn Weisner, Melina Vogt, Rajesh Gontla, Benjamin Buchmuller, Daniel Summerer

RSC Med Chem· February 2024

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Epigenetic CpG duplex marks probed by an evolved DNA reader via a well-tempered conformational plasticity.
Himanshu Singh, Chandan K Das, Benjamin C Buchmuller, Lars V Schäfer, Daniel Summerer

Nucleic Acids Res· July 2023

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Imaging-Based In Situ Analysis of 5-Methylcytosine at Low Repetitive Single Gene Loci with Transcription-Activator-Like Effector Probes.
Anne Jung, Álvaro Munõz-López, Benjamin C Buchmuller, Sudakshina Banerjee, Daniel Summerer

ACS Chem Biol· February 2023

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A high-throughput effector screen identifies a novel small molecule scaffold for inhibition of ten-eleven translocation dioxygenase 2.
Shubhendu Palei, Jörn Weisner, Melina Vogt, Rajesh Gontla, Benjamin Buchmuller, Daniel Summerer

RSC Med Chem· December 2022

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Optochemical Control of TET Dioxygenases Enables Kinetic Insights into the Domain-Dependent Interplay of TET1 and MBD1 while Oxidizing and Reading 5-Methylcytosine.
Tzu-Chen Lin, Shubhendu Palei, Daniel Summerer

ACS Chem Biol· July 2022

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Evolved DNA Duplex Readers for Strand-Asymmetrically Modified 5-Hydroxymethylcytosine/5-Methylcytosine CpG Dyads.
Benjamin C Buchmuller, Jessica Dröden, Himanshu Singh, Shubhendu Palei, Malte Drescher, Daniel Summerer

J Am Chem Soc· February 2022

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Programmable tools for targeted analysis of epigenetic DNA modifications.
Benjamin Buchmuller, Anne Jung, Álvaro Muñoz-López, Daniel Summerer

Curr Opin Chem Biol· August 2021

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Light-Activation of DNA-Methyltransferases.
Jan Wolffgramm, Benjamin Buchmuller, Shubhendu Palei, Álvaro Muñoz-López, Julian Kanne, Daniel Summerer

Angew Chem Int Ed Engl· June 2021

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Pericentromeric Satellite III transcripts induce etoposide resistance.
Julian Kanne, Michelle Hussong, Jörg Isensee, Álvaro Muñoz-López, Jan Wolffgramm, Daniel Summerer

Cell Death Dis· May 2021

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Design and Application of DNA Modification-Specific Transcription-Activator-Like Effectors.
Benjamin Buchmuller, Álvaro Muñoz-López, Mario Gieß, Daniel Summerer

Methods Mol Biol· March 2021

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Engineered TALE Repeats for Enhanced Imaging-Based Analysis of Cellular 5-Methylcytosine.
Álvaro Muñoz-López, Anne Jung, Benjamin Buchmuller, Jan Wolffgramm, Sara Maurer, Daniel Summerer

Chembiochem· February 2021

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Correction: Braun, T., et al. Expanding the Genetic Code for Site-Directed Spin-Labeling. 2019, , 373.
Theresa Braun, Malte Drescher, Daniel Summerer

Int J Mol Sci· February 2021

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Encoded, click-reactive DNA-binding domains for programmable capture of specific chromatin segments.
Anna Witte, Álvaro Muñoz-López, Malte Metz, Michal R Schweiger, Petra Janning, Daniel Summerer

Chem Sci· October 2020

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Designer Receptors for Nucleotide-Resolution Analysis of Genomic 5-Methylcytosine by Cellular Imaging.
Álvaro Muñoz-López, Benjamin Buchmuller, Jan Wolffgramm, Anne Jung, Michelle Hussong, Daniel Summerer

Angew Chem Int Ed Engl· June 2020

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Isoindoline-Based Nitroxides as Bioresistant Spin Labels for Protein Labeling through Cysteines and Alkyne-Bearing Noncanonical Amino Acids.
Theresa Sophie Braun, Pia Widder, Uwe Osswald, Lina Groß, Lara Williams, Daniel Summerer

Chembiochem· April 2020

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Light-Activatable TET-Dioxygenases Reveal Dynamics of 5-Methylcytosine Oxidation and Transcriptome Reorganization.
Shubhendu Palei, Benjamin Buchmuller, Jan Wolffgramm, Álvaro Muñoz-Lopez, Sascha Jung, Daniel Summerer

J Am Chem Soc· April 2020

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Combining site-directed spin labeling in vivo and in-cell EPR distance determination.
Pia Widder, Julian Schuck, Daniel Summerer, Malte Drescher

Phys Chem Chem Phys· March 2020

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Complete Profiling of Methyl-CpG-Binding Domains for Combinations of Cytosine Modifications at CpG Dinucleotides Reveals Differential Read-out in Normal and Rett-Associated States.
Benjamin C Buchmuller, Brinja Kosel, Daniel Summerer

Sci Rep· March 2020

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Programmable Protein-DNA Cross-Linking for the Direct Capture and Quantification of 5-Formylcytosine.
Mario Gieß, Álvaro Muñoz-López, Benjamin Buchmuller, Grzegorz Kubik, Daniel Summerer

J Am Chem Soc· June 2019

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Double Nitroxide Labeling by Copper-Catalyzed Azide-Alkyne Cycloadditions with Noncanonical Amino Acids for Electron Paramagnetic Resonance Spectroscopy.
Pia Widder, Frederic Berner, Daniel Summerer, Malte Drescher

ACS Chem Biol· May 2019

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Site-directed spin labelling of proteins by Suzuki-Miyaura coupling via a genetically encoded aryliodide amino acid.
Anandi Kugele, Theresa Sophie Braun, Pia Widder, Lara Williams, Moritz Johannes Schmidt, Daniel Summerer

Chem Commun (Camb)· February 2019

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