Publications by authors named "David A Nicholson"

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Nascent RNA Folding and RNP Assembly Revealed by Single-molecule Microscopy.
Andrés Bustamante, Tucker J Carrocci, David A Nicholson, Margaret L Rodgers

J Mol Biol· January 2026

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Kinetic and Thermodynamic Control of G-Quadruplex Polymorphism by Na and K Cations.
David A Nicholson, David J Nesbitt

J Phys Chem B· August 2023

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Experiments and Modeling of Flow-Enhanced Nucleation in LLDPE.
David A Nicholson, Marat Andreev, Kenneth L Kearns, Marius Chyasnavichyus, Daria Monaenkova

J Phys Chem B· September 2022

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Could simplified stimuli change how the brain performs visual search tasks? A deep neural network study.
David A Nicholson, Astrid A Prinz

J Vis· June 2022

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Automated annotation of birdsong with a neural network that segments spectrograms.
Yarden Cohen, David Aaron Nicholson, Alexa Sanchioni, Emily K Mallaber, Viktoriya Skidanova

Elife· January 2022

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Measuring Excess Heat Capacities of Deoxyribonucleic Acid (DNA) Folding at the Single-Molecule Level.
David A Nicholson, Bin Jia, David J Nesbitt

J Phys Chem B· September 2021

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Pushing Camera-Based Single-Molecule Kinetic Measurements to the Frame Acquisition Limit with Stroboscopic smFRET.
David A Nicholson, David J Nesbitt

J Phys Chem B· June 2021

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Chirality-Dependent Amino Acid Modulation of RNA Folding.
David A Nicholson, Abhigyan Sengupta, David J Nesbitt

J Phys Chem B· December 2020

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Spectroscopic analysis in molecular simulations with discretized Wiener-Khinchin theorem for Fourier-Laplace transformation.
Akira Koyama, David A Nicholson, Marat Andreev, Gregory C Rutledge, Koji Fukao

Phys Rev E· December 2020

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Amino Acid Stabilization of Nucleic Acid Secondary Structure: Kinetic Insights from Single-Molecule Studies.
David A Nicholson, Abhigyan Sengupta, Hsuan-Lei Sung, David J Nesbitt

J Phys Chem B· November 2018

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Thalamostriatal and cerebellothalamic pathways in a songbird, the Bengalese finch.
David A Nicholson, Todd F Roberts, Samuel J Sober

J Comp Neurol· June 2018

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Peculiar citric acid cycle of hydrothermal vent chemolithoautotroph Hydrogenovibrio crunogenus, and insights into carbon metabolism by obligate autotrophs.
Ishtiaque Quasem, Alexandra N Achille, Brittany A Caddick, Travis A Carter, Camille Daniels, David A Nicholson

FEMS Microbiol Lett· August 2017

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Molecular simulation of flow-enhanced nucleation in n-eicosane melts under steady shear and uniaxial extension.
David A Nicholson, Gregory C Rutledge

J Chem Phys· December 2016

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Analysis of nucleation using mean first-passage time data from molecular dynamics simulation.
David A Nicholson, Gregory C Rutledge

J Chem Phys· April 2016

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Near-infrared silver cluster optically signaling oligonucleotide hybridization and assembling two DNA hosts.
Jeffrey T Petty, David A Nicholson, Orlin O Sergev, Stuart K Graham

Anal Chem· September 2014

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A silver cluster-DNA equilibrium.
Jeffrey T Petty, Orlin O Sergev, David A Nicholson, Peter M Goodwin, Banabihari Giri

Anal Chem· October 2013

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Silver clusters as both chromophoric reporters and DNA ligands.
Jeffrey T Petty, Banabihari Giri, Ian C Miller, David A Nicholson, Orlin O Sergev

Anal Chem· February 2013

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A lightweight, headphones-based system for manipulating auditory feedback in songbirds.
Lukas A Hoffmann, Conor W Kelly, David A Nicholson, Samuel J Sober

J Vis Exp· November 2012

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Evaluating oral stimulation as a treatment for dysphagia after stroke.
Maxine L Power, Christopher H Fraser, Anthony Hobson, Salil Singh, Pippa Tyrrell, David A Nicholson

Dysphagia· January 2006

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The use of minimal preparation computed tomography for the primary investigation of colon cancer in frail or elderly patients.
Philip Robinson, Hugh Burnett, David A Nicholson

Clin Radiol· May 2002

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