Publications by authors named "David A Simpson"

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IFN-Mediated Bronchial Epithelium Cellular Senescence in Chronic Obstructive Pulmonary Disease.
Hong Guo-Parke, Oisin Cappa, Dermot A Linden, Ben S Barksby, Rachel A Burgoyne, David A Simpson

Am J Respir Cell Mol Biol· December 2025

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Low circulating miR-190a-5p predicts progression of chronic kidney disease.
David P Baird, Jinnan Zang, Katie L Connor, Oliver Teenan, Maximilian Reck, David A Simpson

Nat Commun· October 2025

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Functionalized Fluorescent Nanodiamonds with Millisecond Spin Relaxation Times.
Mina Barzegaramiriolya, Erin S Grant, Trent Ralph, Yang Li, Giannis Thalassinos, David A Simpson

ACS Nano· October 2025

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Combining analysis of individual and wastewater whole genome sequencing improves SARS-CoV-2 surveillance.
Evan P Troendle, Andrew J Lee, Marina I Reyne, Danielle M Allen, Stephen J Bridgett, David A Simpson

Water Res· September 2025

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Wastewater monitoring of human and avian influenza A viruses in Northern Ireland: a genomic surveillance study.
Andrew J Lee, Stephen Carson, Marina I Reyne, Andrew Marshall, Daniel Moody, David A Simpson

Lancet Microbe· December 2024

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SARS-CoV-2 introductions to the island of Ireland: a phylogenetic and geospatiotemporal study of infection dynamics.
Alan M Rice, Evan P Troendle, Stephen J Bridgett, Behnam Firoozi Nejad, Jennifer M McKinley, David A Simpson

Genome Med· December 2024

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Optical Tweezers Assembled Nanodiamond Quantum Sensors.
Adam Stewart, Ying Zhu, Yiting Liu, David A Simpson, Peter J Reece

Nano Lett· October 2024

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The TGFβ Induced MicroRNAome of the Trabecular Meshwork.
Chelsey Doyle, Breedge Callaghan, Anton W Roodnat, Lee Armstrong, Karen Lester, David A Simpson

Cells· June 2024

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Global analysis of Poales diversification - parallel evolution in space and time into open and closed habitats.
Tammy L Elliott, Daniel Spalink, Isabel Larridon, Alexandre Rizzo Zuntini, Marcial Escudero, David A Simpson

New Phytol· April 2024

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Single-Cell RNA Sequencing Reveals Cardiac Fibroblast-Specific Transcriptomic Changes in Dilated Cardiomyopathy.
Adam Russell-Hallinan, Oisín Cappa, Lauren Kerrigan, Claire Tonry, Kevin Edgar, David A Simpson

Cells· April 2024

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Mapping the daily rhythmic transcriptome in the diabetic retina.
Ryan P Silk, Hanagh R Winter, Ouria Dkhissi-Benyahya, Carmella Evans-Molina, Alan W Stitt, David A Simpson

Vision Res· January 2024

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Mesenchymal stromal cells-derived extracellular vesicles reprogramme macrophages in ARDS models through the miR-181a-5p-PTEN-pSTAT5-SOCS1 axis.
Yue Su, Johnatas Dutra Silva, Declan Doherty, David A Simpson, Daniel J Weiss

Thorax· June 2023

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Zinc Supplementation Induced Transcriptional Changes in Primary Human Retinal Pigment Epithelium: A Single-Cell RNA Sequencing Study to Understand Age-Related Macular Degeneration.
Eszter Emri, Oisin Cappa, Caoimhe Kelly, Elod Kortvely, John Paul SanGiovanni, David A Simpson

Cells· February 2023

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Nonmonotonic Superparamagnetic Behavior of the Ferritin Iron Core Revealed via Quantum Spin Relaxometry.
Erin S Grant, Liam T Hall, Lloyd C L Hollenberg, Gawain McColl, David A Simpson

ACS Nano· January 2023

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Genome-Wide RNA Sequencing of Human Trabecular Meshwork Cells Treated with TGF-β1: Relevance to Pseudoexfoliation Glaucoma.
Anton W Roodnat, Breedge Callaghan, Chelsey Doyle, Megan Henry, Katarzyna Goljanek-Whysall, David A Simpson

Biomolecules· November 2022

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Author Correction: Short and long-term effect of dexamethasone on the transcriptome profile of primary human trabecular meshwork cells in vitro.
Kandasamy Kathirvel, Karen Lester, Ravinarayanan Haribalaganesh, Ramasamy Krishnadas, Veerappan Muthukkaruppan, David A Simpson

Sci Rep· July 2022

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Genome-wide transcriptome profiling of human trabecular meshwork cells treated with TGF-β2.
Breedge Callaghan, Karen Lester, Brian Lane, Xiaochen Fan, Katarzyna Goljanek-Whysall, David A Simpson

Sci Rep· June 2022

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Short and long-term effect of dexamethasone on the transcriptome profile of primary human trabecular meshwork cells in vitro.
Kandasamy Kathirvel, Karen Lester, Ravinarayanan Haribalaganesh, Ramasamy Krishnadas, Veerappan Muthukkaruppan, David A Simpson

Sci Rep· May 2022

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Mini-XT, a miniaturized tagmentation-based protocol for efficient sequencing of SARS-CoV-2.
Marc Fuchs, Clara Radulescu, Miao Tang, Arun Mahesh, Deborah Lavin, David A Simpson

J Transl Med· March 2022

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Acoustomicrofluidic Concentration and Signal Enhancement of Fluorescent Nanodiamond Sensors.
Asma Akther, Ella P Walsh, Philipp Reineck, Brant C Gibson, Takeshi Ohshima, David A Simpson

Anal Chem· December 2021

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Quantum magnetic imaging of iron organelles within the pigeon cochlea.
Robert W de Gille, Julia M McCoey, Liam T Hall, Jean-Philippe Tetienne, E Pascal Malkemper, David A Simpson

Proc Natl Acad Sci U S A· November 2021

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Single-cell transcriptomic profiling provides insights into retinal endothelial barrier properties.
Mark I Watson, Peter Barabas, Mary McGahon, Megan McMahon, Marc A Fuchs, David A Simpson

Mol Vis· August 2021

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Preferential coupling of diamond NV centres in step-index fibres.
Shuo Li, Dongbi Bai, Marco Capelli, Qiang Sun, Shahraam Afshar V, David A Simpson

Opt Express· May 2021

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Re-examining ferritin-bound iron: current and developing clinical tools.
Erin S Grant, Danielle B Clucas, Gawain McColl, Liam T Hall, David A Simpson

Clin Chem Lab Med· February 2021

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New Guinea has the world's richest island flora.
Rodrigo Cámara-Leret, David G Frodin, Frits Adema, Christiane Anderson, Marc S Appelhans, David A Simpson

Nature· August 2020

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