Publications by authors named "David Ando"

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BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale.
Tyler W H Backman, Christina Schenk, Tijana Radivojevic, David Ando, Jahnavi Singh

PLoS Comput Biol· November 2023

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Scalable and automated CRISPR-based strain engineering using droplet microfluidics.
Kosuke Iwai, Maren Wehrs, Megan Garber, Jess Sustarich, Lauren Washburn, David Ando

Microsyst Nanoeng· March 2022

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Genome-Scale C Fluxomics Modeling for Metabolic Engineering of Saccharomyces cerevisiae.
David Ando, Héctor García Martín

Methods Mol Biol· June 2019

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Two-Scale C Metabolic Flux Analysis for Metabolic Engineering.
David Ando, Hector Garcia Martin

Methods Mol Biol· July 2018

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Constraining Genome-Scale Models to Represent the Bow Tie Structure of Metabolism for C Metabolic Flux Analysis.
Tyler W H Backman, David Ando, Jahnavi Singh, Jay D Keasling, Héctor García Martín

Metabolites· January 2018

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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization.
William C Morrell, Garrett W Birkel, Mark Forrer, Teresa Lopez, Tyler W H Backman, David Ando

ACS Synth Biol· December 2017

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Cooperative Interactions between Different Classes of Disordered Proteins Play a Functional Role in the Nuclear Pore Complex of Baker's Yeast.
David Ando, Ajay Gopinathan

PLoS One· August 2017

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The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism.
Garrett W Birkel, Amit Ghosh, Vinay S Kumar, Daniel Weaver, David Ando

BMC Bioinformatics· April 2017

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Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism.
Garrett W Birkel, Amit Ghosh, Vinay S Kumar, Daniel Weaver, David Ando

BMC Bioinformatics· April 2017

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C Metabolic Flux Analysis for Systematic Metabolic Engineering of for Overproduction of Fatty Acids.
Amit Ghosh, David Ando, Jennifer Gin, Weerawat Runguphan, Charles Denby

Front Bioeng Biotechnol· October 2016

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Cytoskeletal Network Morphology Regulates Intracellular Transport Dynamics.
David Ando, Nickolay Korabel, Kerwyn Casey Huang, Ajay Gopinathan

Biophys J· October 2015

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Cooperative protofilament switching emerges from inter-motor interference in multiple-motor transport.
David Ando, Michelle K Mattson, Jing Xu, Ajay Gopinathan

Sci Rep· December 2014

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Physical motif clustering within intrinsically disordered nucleoporin sequences reveals universal functional features.
David Ando, Michael Colvin, Michael Rexach, Ajay Gopinathan

PLoS One· May 2014

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Nuclear pore complex protein sequences determine overall copolymer brush structure and function.
David Ando, Roya Zandi, Yong Woon Kim, Michael Colvin, Michael Rexach

Biophys J· May 2014

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