Publications by authors named "David Ibberson"

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Single-step discovery of high-affinity RNA ligands by UltraSelex.
Yaqing Zhang, Yuan Jiang, David Kuster, Qiwei Ye, Wenhao Huang, David Ibberson

Nat Chem Biol· July 2025

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Dissecting the enhancer gene regulatory network in early Drosophila spermatogenesis.
Patrick van Nierop Y Sanchez, Pallavi Santhi Sekhar, Kerem Yildirim, Tim Lange, Laura Zoe Kreplin, David Ibberson

Nat Commun· July 2025

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Differential expression and evolutionary diversification of RNA helicases in Boechera sexual and apomictic reproduction.
Laura Binmöller, Christopher Volkert, Christiane Kiefer, Luise Zühl, Magdalena W Slawinska, David Ibberson

J Exp Bot· April 2024

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Dynamic YAP expression in the non-parenchymal liver cell compartment controls heterologous cell communication.
Kaijing Liu, Lilija Wehling, Shan Wan, Sofia M E Weiler, Marcell Tóth, David Ibberson

Cell Mol Life Sci· March 2024

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MediMer: a versatile do-it-yourself peptide-receptive MHC class I multimer platform for tumor neoantigen-specific T cell detection.
Marten Meyer, Christina Parpoulas, Titouan Barthélémy, Jonas P Becker, Pornpimol Charoentong, David Ibberson

Front Immunol· January 2024

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Chromosome 8p engineering reveals increased metastatic potential targetable by patient-specific synthetic lethality in liver cancer.
Thorben Huth, Emely C Dreher, Steffen Lemke, Sarah Fritzsche, Raisatun N Sugiyanto, David Ibberson

Sci Adv· December 2023

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Spatially Resolved Multi-Omics Single-Cell Analyses Inform Mechanisms of Immune Dysfunction in Pancreatic Cancer.
Suhail Yousuf, Mengjie Qiu, Lena Voith von Voithenberg, Johannes Hulkkonen, Igor Macinkovic, David Ibberson

Gastroenterology· October 2023

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Parametric Amplifiers Based on Quantum Dots.
Laurence Cochrane, Theodor Lundberg, David J Ibberson, Lisa A Ibberson, Louis Hutin

Phys Rev Lett· May 2022

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RH17 restricts reproductive fate and represses autonomous seed coat development in sexual Arabidopsis.
Ron Eric Stein, Berit Helge Nauerth, Laura Binmöller, Luise Zühl, Anna Loreth, David Ibberson

Development· October 2021

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Extensive 5'-surveillance guards against non-canonical NAD-caps of nuclear mRNAs in yeast.
Yaqing Zhang, David Kuster, Tobias Schmidt, Daniel Kirrmaier, Gabriele Nübel, David Ibberson

Nat Commun· November 2020

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RNA Sequencing of Hepatobiliary Cancer Cell Lines: Data and Applications to Mutational and Transcriptomic Profiling.
Dominique Scherer, Marcela Dávila Dávila López, Benjamin Goeppert, Sanna Abrahamsson, Rosa González González Silos, David Ibberson

Cancers (Basel)· September 2020

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Gene Function Rather than Reproductive Mode Drives the Evolution of RNA Helicases in Sexual and Apomictic Boechera.
Markus Kiefer, Berit H Nauerth, Christopher Volkert, David Ibberson, Anna Loreth

Genome Biol Evol· May 2020

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Differential activity of F-box genes and E3 ligases distinguishes sexual versus apomictic germline specification in Boechera.
Luise Zühl, Christopher Volkert, David Ibberson, Anja Schmidt

J Exp Bot· October 2019

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The genome of the jellyfish Aurelia and the evolution of animal complexity.
David A Gold, Takeo Katsuki, Yang Li, Xifeng Yan, Michael Regulski, David Ibberson

Nat Ecol Evol· January 2019

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Transcriptomes of Trypanosoma brucei rhodesiense from sleeping sickness patients, rodents and culture: Effects of strain, growth conditions and RNA preparation methods.
Julius Mulindwa, Kevin Leiss, David Ibberson, Kevin Kamanyi Marucha, Claudia Helbig

PLoS Negl Trop Dis· February 2018

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iDamIDseq and iDEAR: an improved method and computational pipeline to profile chromatin-binding proteins.
Jose Arturo Gutierrez-Triana, Juan L Mateo, David Ibberson, Soojin Ryu, Joachim Wittbrodt

Development· November 2016

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Sequencing of a patient with balanced chromosome abnormalities and neurodevelopmental disease identifies disruption of multiple high risk loci by structural variation.
Jonathon Blake, Andrew Riddell, Susanne Theiss, Alexis Perez Gonzalez, Bettina Haase, David Ibberson

PLoS One· January 2016

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Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli.
Christina Kahramanoglou, Aswin S N Seshasayee, Ana I Prieto, David Ibberson, Sabine Schmidt

Nucleic Acids Res· March 2011

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RNA degradation compromises the reliability of microRNA expression profiling.
David Ibberson, Vladimir Benes, Martina U Muckenthaler, Mirco Castoldi

BMC Biotechnol· December 2009

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Cyclical DNA methylation of a transcriptionally active promoter.
Raphaël Métivier, Rozenn Gallais, Christophe Tiffoche, Christine Le Péron, Renata Z Jurkowska, David Ibberson

Nature· March 2008

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Transient cyclical methylation of promoter DNA.
Sara Kangaspeska, Brenda Stride, Raphaël Métivier, Maria Polycarpou-Schwarz, David Ibberson

Nature· March 2008

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Multiple mechanisms induce transcriptional silencing of a subset of genes, including oestrogen receptor alpha, in response to deacetylase inhibition by valproic acid and trichostatin A.
George Reid, Raphaël Métivier, Chin-Yo Lin, Stefanie Denger, David Ibberson

Oncogene· July 2005

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