Publications by authors named "David Winogradoff"

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The structure and physical properties of a packaged bacteriophage particle.
Kush Coshic, Christopher Maffeo, David Winogradoff, Aleksei Aksimentiev

Nature· March 2024

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Benchmarking Molecular Dynamics Force Fields for All-Atom Simulations of Biological Condensates.
Kumar Sarthak, David Winogradoff, Yingda Ge, Sua Myong, Aleksei Aksimentiev

J Chem Theory Comput· June 2023

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Benchmarking Molecular Dynamics Force Fields for All-Atom Simulations of Biological Condensates.
Kumar Sarthak, David Winogradoff, Yingda Ge, Sua Myong, Aleksei Aksimentiev

bioRxiv· April 2023

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Percolation transition prescribes protein size-specific barrier to passive transport through the nuclear pore complex.
David Winogradoff, Han-Yi Chou, Christopher Maffeo, Aleksei Aksimentiev

Nat Commun· September 2022

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Chiral Systems Made from DNA.
David Winogradoff, Pin-Yi Li, Himanshu Joshi, Lauren Quednau, Christopher Maffeo

Adv Sci (Weinh)· March 2021

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Molecular dynamics simulations of DNA-DNA and DNA-protein interactions.
Jejoong Yoo, David Winogradoff, Aleksei Aksimentiev

Curr Opin Struct Biol· October 2020

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Protein unfolding by SDS: the microscopic mechanisms and the properties of the SDS-protein assembly.
David Winogradoff, Shalini John, Aleksei Aksimentiev

Nanoscale· March 2020

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The Oligomerization Landscape of Histones.
Haiqing Zhao, David Winogradoff, Yamini Dalal, Garegin A Papoian

Biophys J· May 2019

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Molecular Mechanism of Spontaneous Nucleosome Unraveling.
David Winogradoff, Aleksei Aksimentiev

J Mol Biol· January 2019

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Promiscuous Histone Mis-Assembly Is Actively Prevented by Chaperones.
Haiqing Zhao, David Winogradoff, Minh Bui, Yamini Dalal, Garegin A Papoian

J Am Chem Soc· October 2016

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Shearing of the CENP-A dimerization interface mediates plasticity in the octameric centromeric nucleosome.
David Winogradoff, Haiqing Zhao, Yamini Dalal, Garegin A Papoian

Sci Rep· November 2015

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The Acetylation Landscape of the H4 Histone Tail: Disentangling the Interplay between the Specific and Cumulative Effects.
David Winogradoff, Ignacia Echeverria, Davit A Potoyan, Garegin A Papoian

J Am Chem Soc· May 2015

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