Publications by authors named "Deborah Yoder-Himes"

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Long-term culturing of in static, minimal nutrient medium results in increased pyocyanin production, reduced biofilm production, and loss of motility.
Rhiannon E Cecil, Elana Ornelas, Anh Phan, Nahui Olin Medina-Chavez, Michael Travisano, Deborah R Yoder-Himes

Appl Environ Microbiol· November 2025

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untargeted polar metabolomics data from and biofilm supernatants.
Hayden Skaggs, Deborah R Yoder-Himes

Microbiol Resour Announc· June 2025

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-mediated inhibition of growth and biofilm formation.
Tiffany J Brandt, Hayden Skaggs, Thomas Hundley, Deborah R Yoder-Himes

J Bacteriol· April 2025

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Examining the influence of environmental factors on Acanthamoeba castellanii and Pseudomonas aeruginosa in co-culture.
Rhiannon E Cecil, Deborah R Yoder-Himes

PLoS One· June 2024

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Porphyromonas gingivalis Tyrosine Kinase Is a Fitness Determinant in Polymicrobial Infections.
John D Perpich, Lan Yakoumatos, Kendall S Stocke, Gina R Lewin, Anayancy Ramos, Deborah R Yoder-Himes

Infect Immun· June 2022

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Bactericidal effects of high-energy visible light on common otitis media pathogens.
Shae D Morgan, Deborah Yoder-Himes, Douglas Jackson, John Naber, Rachel Berry

J Appl Microbiol· March 2022

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Porphyromonas gingivalis genes conferring fitness in a tobacco-rich environment.
Justin A Hutcherson, Himabindu Gogenini, Gwyneth J Lamont, Daniel P Miller, Zuzanna Nowakowska, Deborah Yoder-Himes

Mol Oral Microbiol· January 2020

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Detection of Volatile Compounds Emitted by Bacteria in Wounds Using Gas Sensors.
Carlos Salinas Alvarez, Daniel Sierra-Sosa, Begonya Garcia-Zapirain, Deborah Yoder-Himes, Adel Elmaghraby

Sensors (Basel)· March 2019

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Genes Contributing to Fitness in Abscess and Epithelial Cell Colonization Environments.
Daniel P Miller, Justin A Hutcherson, Yan Wang, Zuzanna M Nowakowska, Jan Potempa, Deborah R Yoder-Himes

Front Cell Infect Microbiol· July 2018

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Pathophysiology of Escherichia coli pneumonia: Respective contribution of pathogenicity islands to virulence.
Mathilde Phillips-Houlbracq, Jean-Damien Ricard, Arnaud Foucrier, Deborah Yoder-Himes, Stéphane Gaudry

Int J Med Microbiol· March 2018

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A putative lateral flagella of the cystic fibrosis pathogen Burkholderia dolosa regulates swimming motility and host cytokine production.
Damien Roux, Matthew Schaefers, Bradley S Clark, Molly Weatherholt, Diane Renaud, Deborah R Yoder-Himes

PLoS One· January 2018

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Immune Recognition of the Epidemic Cystic Fibrosis Pathogen Burkholderia dolosa.
Damien Roux, Molly Weatherholt, Bradley Clark, Mihaela Gadjeva, Diane Renaud, Deborah R Yoder-Himes

Infect Immun· June 2017

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An Oxygen-Sensing Two-Component System in the Burkholderia cepacia Complex Regulates Biofilm, Intracellular Invasion, and Pathogenicity.
Matthew M Schaefers, Tiffany L Liao, Nicole M Boisvert, Damien Roux, Deborah Yoder-Himes

PLoS Pathog· January 2017

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Comprehensive identification of virulence factors required for respiratory melioidosis using Tn-seq mutagenesis.
Maria G Gutierrez, Deborah R Yoder-Himes, Jonathan M Warawa

Front Cell Infect Microbiol· June 2016

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Development and evaluation of murine lung-specific disease models for Pseudomonas aeruginosa applicable to therapeutic testing.
Matthew B Lawrenz, Ashley E Biller, Daniel E Cramer, Jennifer L Kraenzle, Julie B Sotsky, Deborah R Yoder-Himes

Pathog Dis· July 2015

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Genome Sequence of Porphyromonas gingivalis Strain HG66 (DSM 28984).
Huma Siddiqui, Deborah Ruth Yoder-Himes, Danuta Mizgalska, Ky-Anh Nguyen, Jan Potempa

Genome Announc· September 2014

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A comprehensive analysis of in vitro and in vivo genetic fitness of Pseudomonas aeruginosa using high-throughput sequencing of transposon libraries.
David Skurnik, Damien Roux, Hugues Aschard, Vincent Cattoir, Deborah Yoder-Himes

PLoS Pathog· April 2014

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Enhanced in vivo fitness of carbapenem-resistant oprD mutants of Pseudomonas aeruginosa revealed through high-throughput sequencing.
David Skurnik, Damien Roux, Vincent Cattoir, Olga Danilchanka, Xi Lu, Deborah R Yoder-Himes

Proc Natl Acad Sci U S A· December 2013

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Genomic diversity of Escherichia isolates from diverse habitats.
Seungdae Oh, Sarah Buddenborg, Deborah R Yoder-Himes, James M Tiedje, Konstantinos T Konstantinidis

PLoS One· May 2013

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Identification of T6SS-dependent effector and immunity proteins by Tn-seq in Vibrio cholerae.
Tao G Dong, Brian T Ho, Deborah R Yoder-Himes, John J Mekalanos

Proc Natl Acad Sci U S A· February 2013

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The single-nucleotide resolution transcriptome of Pseudomonas aeruginosa grown in body temperature.
Omri Wurtzel, Deborah R Yoder-Himes, Kook Han, Ajai A Dandekar, Sarit Edelheit

PLoS Pathog· September 2012

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A vast collection of microbial genes that are toxic to bacteria.
Aya Kimelman, Asaf Levy, Hila Sberro, Shahar Kidron, Azita Leavitt, Deborah R Yoder-Himes

Genome Res· April 2012

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Evaluating the performance of oligonucleotide microarrays for bacterial strains with increasing genetic divergence from the reference strain.
Seungdae Oh, Deborah R Yoder-Himes, James Tiedje, Joonhong Park, Konstantinos T Konstantinidis

Appl Environ Microbiol· May 2010

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Identification of potential therapeutic targets for Burkholderia cenocepacia by comparative transcriptomics.
Deborah R Yoder-Himes, Konstantinos T Konstantinidis, James M Tiedje

PLoS One· January 2010

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Regulation of the Myxococcus xanthus C-signal-dependent Omega4400 promoter by the essential developmental protein FruA.
Deborah R Yoder-Himes, Lee Kroos

J Bacteriol· July 2006

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