Publications by authors named "Deepa Acharya"

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Author Correction: A universal language for finding mass spectrometry data patterns.
Tito Damiani, Alan K Jarmusch, Allegra T Aron, Daniel Petras, Vanessa V Phelan, Deepa D Acharya

Nat Methods· September 2025

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A universal language for finding mass spectrometry data patterns.
Tito Damiani, Alan K Jarmusch, Allegra T Aron, Daniel Petras, Vanessa V Phelan, Deepa D Acharya

Nat Methods· June 2025

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MS-RT: A Method for Evaluating MS/MS Clustering Performance for Metabolomics Data.
Xianghu Wang, Yasin El Abiead, Deepa D Acharya, Christopher J Brown, Ken Clevenger

J Proteome Res· April 2025

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Application of a Cell-Free Synthetic Biology Platform for the Reconstitution of Teleocidin B and UK-2A Precursor Biosynthetic Pathways.
Krishna Madduri, Deepa Acharya, Adam Lescallette, Jeremy McFadden, Paul Ketterer

ACS Synth Biol· November 2024

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Network Topology Evaluation and Transitive Alignments for Molecular Networking.
Xianghu Wang, Michael Strobel, Allegra T Aron, Vanessa V Phelan, Deepa D Acharya

J Am Soc Mass Spectrom· September 2024

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A secondary metabolite drives intraspecies antagonism in a gut symbiont that is inhibited by cell-wall acetylation.
Mustafa Özçam, Jee-Hwan Oh, Restituto Tocmo, Deepa Acharya, Shenwei Zhang

Cell Host Microbe· June 2022

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Minimum risk of intestinal parasitic infection to the visitors of Ghandruk, Kaski, Nepal: a pilot survey.
Rajendra Prasad Parajuli, Janak Raj Subedi, Pitambar Dhakal, Pramod Kumor Mehta, Sonisha Prajapati, Umesh Acharya, Deepa Acharya

Ann Parasitol· May 2022

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GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.
Daniel Petras, Vanessa V Phelan, Deepa Acharya, Andrew E Allen, Allegra T Aron

Nat Methods· February 2022

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Publisher Correction: Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery.
Bahar Behsaz, Edna Bode, Alexey Gurevich, Yan-Ni Shi, Florian Grundmann, Deepa Acharya

Nat Commun· July 2021

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Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery.
Bahar Behsaz, Edna Bode, Alexey Gurevich, Yan-Ni Shi, Florian Grundmann, Deepa Acharya

Nat Commun· May 2021

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A community resource for paired genomic and metabolomic data mining.
Michelle A Schorn, Stefan Verhoeven, Lars Ridder, Florian Huber, Deepa D Acharya

Nat Chem Biol· April 2021

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Chemically informed analyses of metabolomics mass spectrometry data with Qemistree.
Anupriya Tripathi, Yoshiki Vázquez-Baeza, Julia M Gauglitz, Mingxun Wang, Kai Dührkop, Deepa D Acharya

Nat Chem Biol· February 2021

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Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery.
Amanda Hurley, Marc G Chevrette, Deepa D Acharya, Gabriel L Lozano, Manuel Garavito

mBio· February 2021

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Omics Technologies to Understand Activation of a Biosynthetic Gene Cluster in Micromonospora sp. WMMB235: Deciphering Keyicin Biosynthesis.
Deepa Acharya, Ian Miller, Yusi Cui, Doug R Braun, Mark E Berres

ACS Chem Biol· June 2019

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Complete Genome Sequence of sp. Strain WMMA184, a Marine Coral-Associated Bacterium.
Doug R Braun, Marc G Chevrette, Deepa Acharya, Cameron R Currie, Scott R Rajski

Genome Announc· February 2018

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Draft Genome Sequence of Micromonospora sp. Strain WMMA1996, a Marine Sponge-Associated Bacterium.
Doug R Braun, Marc G Chevrette, Deepa D Acharya, Cameron R Currie, Scott R Rajski

Genome Announc· February 2018

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Safety and utility of acute electroconvulsive therapy for agitation and aggression in dementia.
Deepa Acharya, David G Harper, Eric D Achtyes, Stephen J Seiner, Jack A Mahdasian

Int J Geriatr Psychiatry· March 2015

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Frontal lobe γ-aminobutyric acid levels during adolescence: associations with impulsivity and response inhibition.
Marisa M Silveri, Jennifer T Sneider, David J Crowley, Michael J Covell, Deepa Acharya

Biol Psychiatry· August 2013

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