Publications by authors named "Derek Lundberg"

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Lab to field: Challenges and opportunities for plant biology.
Derek S Lundberg, Joy Bergelson, Fabrice Roux, Detlef Weigel, Talia L Karasov

Cell Host Microbe· August 2025

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A major trade-off between growth and defense in Arabidopsis thaliana can vanish in field conditions.
Derek S Lundberg, Sonja Kersten, Ezgi Mehmetoğlu Boz, Pratchaya Pramoj Na Ayutthaya, Wangsheng Zhu

PLoS Biol· July 2025

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Root bacteria hack another plant hormone and affect yield.
Hugo R Barajas, Derek S Lundberg

Cell Host Microbe· June 2025

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Spatial metatranscriptomics resolves host-bacteria-fungi interactomes.
Sami Saarenpää, Or Shalev, Haim Ashkenazy, Vanessa Carlos, Derek Severi Lundberg

Nat Biotechnol· September 2024

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Bacterial Spermosphere Inoculants Alter -Plant Physiology and Host Bacterial Microbiome.
Andrea Sanchez Barrios, Derek Lundberg, Laura de Lorenzo, B Kirtley Amos, Meera Nair

Plants (Basel)· June 2024

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Contrasting patterns of microbial dominance in the phyllosphere.
Derek S Lundberg, Roger de Pedro Jové, Pratchaya Pramoj Na Ayutthaya, Talia L Karasov, Or Shalev

Proc Natl Acad Sci U S A· December 2022

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The changing influence of host genetics on the leaf fungal microbiome throughout plant development.
Talia L Karasov, Derek S Lundberg

PLoS Biol· August 2022

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Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant.
Or Shalev, Talia L Karasov, Derek S Lundberg, Haim Ashkenazy, Pratchaya Pramoj Na Ayutthaya

Nat Ecol Evol· April 2022

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Multiple Sources of Introduction of North American Arabidopsis thaliana from across Eurasia.
Gautam Shirsekar, Jane Devos, Sergio M Latorre, Andreas Blaha, Maique Queiroz Dias, Derek S Lundberg

Mol Biol Evol· December 2021

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Host-associated microbe PCR (hamPCR) enables convenient measurement of both microbial load and community composition.
Derek S Lundberg, Pratchaya Pramoj Na Ayutthaya, Annett Strauß, Gautam Shirsekar, Wen-Sui Lo

Elife· July 2021

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HASTY modulates miRNA biogenesis by linking pri-miRNA transcription and processing.
Damian A Cambiagno, Axel J Giudicatti, Agustin L Arce, Delfina Gagliardi, Lei Li, Derek S Lundberg

Mol Plant· March 2021

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Combining whole-genome shotgun sequencing and rRNA gene amplicon analyses to improve detection of microbe-microbe interaction networks in plant leaves.
Julian Regalado, Derek S Lundberg, Oliver Deusch, Sonja Kersten, Talia Karasov

ISME J· August 2020

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Blue Native Polyacrylamide Gel Electrophoresis (BN-PAGE) for the Analysis of Protein Oligomers in Plants.
Pratchaya Pramoj Na Ayutthaya, Derek Lundberg, Detlef Weigel, Lei Li

Curr Protoc Plant Biol· June 2020

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Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales.
Talia L Karasov, Juliana Almario, Claudia Friedemann, Wei Ding, Michael Giolai, Derek S Lundberg

Cell Host Microbe· July 2018

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Root-exuded coumarin shapes the root microbiome.
Derek S Lundberg, Paulo J P L Teixeira

Proc Natl Acad Sci U S A· May 2018

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Methods for Genotyping-by-Sequencing.
Beth A Rowan, Danelle K Seymour, Eunyoung Chae, Derek S Lundberg, Detlef Weigel

Methods Mol Biol· January 2018

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Genomic features of bacterial adaptation to plants.
Asaf Levy, Isai Salas Gonzalez, Maximilian Mittelviefhaus, Scott Clingenpeel, Sur Herrera Paredes, Derek S Lundberg

Nat Genet· December 2017

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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant.
Maggie R Wagner, Derek S Lundberg, Tijana G Del Rio, Susannah G Tringe, Jeffery L Dangl

Nat Commun· July 2016

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Learning Microbial Interaction Networks from Metagenomic Count Data.
Surojit Biswas, Meredith Mcdonald, Derek S Lundberg, Jeffery L Dangl, Vladimir Jojic

J Comput Biol· June 2016

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ProDeGe: a computational protocol for fully automated decontamination of genomes.
Kristin Tennessen, Evan Andersen, Scott Clingenpeel, Christian Rinke, Derek S Lundberg

ISME J· January 2016

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PLANT MICROBIOME. Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa.
Sarah L Lebeis, Sur Herrera Paredes, Derek S Lundberg, Natalie Breakfield, Jase Gehring

Science· August 2015

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XVI Congress on Molecular Plant-Microbe Interactions Meeting Report.
Cris Argüeso, Bethany Huot, Panya Kim, Derek Lundberg, Morgan Halane

Mol Plant Microbe Interact· November 2014

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MT-Toolbox: improved amplicon sequencing using molecule tags.
Scott M Yourstone, Derek S Lundberg, Jeffery L Dangl, Corbin D Jones

BMC Bioinformatics· August 2014

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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative.
Maggie R Wagner, Derek S Lundberg, Devin Coleman-Derr, Susannah G Tringe, Jeffery L Dangl

Ecol Lett· June 2014

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Practical innovations for high-throughput amplicon sequencing.
Derek S Lundberg, Scott Yourstone, Piotr Mieczkowski, Corbin D Jones, Jeffery L Dangl

Nat Methods· October 2013

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